RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 C2orf50Q96LR7 162 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 MGAT4CQ9UBM8 478 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 ZNF580Q9UK33 172 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 DMRT1Q9Y5R6 373 aa7.44□□□□□ -1.22
RFX3-201ENST00000302303 PIGBOS1A0A0B4J2F0 54 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 C13orf42A0A1B0GVH6 325 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 H0YIZ8 118 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 IFNA21P01568 189 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 MBPP02686 304 aaPredicted RBP7.43□□□□□ -1.22
RFX3-201ENST00000302303 APELAP0DMC3 54 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 HKR1P10072 659 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 MFAP2P55001 183 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 KRTAP10-3P60369 221 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 KLK9Q2XQG4 91 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 BSXQ3C1V8 233 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 AKIRIN2Q53H80 203 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 Q5BKY6 102 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 C9orf152Q5JTZ5 239 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 STPG2Q8N412 459 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 LFNGQ8NES3 379 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 OR1L8Q8NGR8 309 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 RNASE11Q8TAA1 199 aaKnown RBP7.43□□□□□ -1.22
RFX3-201ENST00000302303 GRPEL2Q8TAA5 225 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 FYTTD1Q96QD9 318 aaKnown RBP7.43□□□□□ -1.22
RFX3-201ENST00000302303 RNF126Q9BV68 326 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 COMMD5Q9GZQ3 224 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 MED28Q9H204 178 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 RBKSQ9H477 322 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 FKBP11Q9NYL4 201 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 KLK9Q9UKQ9 250 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 WSB1Q9Y6I7 421 aa7.43□□□□□ -1.22
RFX3-201ENST00000302303 C5orf51A6NDU8 294 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 FAM90A26D6RGX4 464 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 CNIH1O95406 144 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 CRYGCP07315 174 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TRAPPC2P0DI81 140 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TRAPPC2BP0DI82 140 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 CTRB1P17538 263 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 MDKP21741 143 aaPredicted RBP7.42□□□□□ -1.22
RFX3-201ENST00000302303 PROK1P58294 105 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 SPCS3P61009 180 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 POLR2GP62487 172 aaKnown RBP eCLIP7.42□□□□□ -1.22
RFX3-201ENST00000302303 KIAA0141Q14154 515 aaPredicted RBP7.42□□□□□ -1.22
RFX3-201ENST00000302303 PVRIGQ6DKI7 326 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 CTRB2Q6GPI1 263 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 GSG1LQ6UXU4 331 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TTC9CQ8N5M4 171 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 NMES1Q9C002 83 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 PARP11Q9NR21 331 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 GSKIPQ9P0R6 139 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 RCL1Q9Y2P8 373 aaKnown RBP7.42□□□□□ -1.22
RFX3-201ENST00000302303 hCG_2014768A0A024R1R8 64 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TRAV14DV4A0A0A6YYC5 116 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TMEM89A2RUT3 159 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 FAM25EA8MYX2 175 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 K7EPK0 472 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 AP4M1O00189 453 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 KCNAB3O43448 404 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 IFNA17P01571 189 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 IGLV1-40P01703 118 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 REG1AP05451 166 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 RAB32Q13637 225 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TCTEX1D4Q5JR98 221 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 OR2C3Q8N628 320 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 OR1S1Q8NH92 325 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 ST6GAL2Q96JF0 529 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 FANCD2OSQ96PS1 177 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 SPIN2AQ99865 258 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 SPIN2BQ9BPZ2 258 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 SRSF8Q9BRL6 282 aaKnown RBP7.42□□□□□ -1.22
RFX3-201ENST00000302303 ZNF436Q9C0F3 470 aaPredicted RBP7.42□□□□□ -1.22
RFX3-201ENST00000302303 MAGT1Q9H0U3 335 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 ATRQ13535 2644 aa7.42□□□□□ -1.22
RFX3-201ENST00000302303 TENM1Q9UKZ4 2725 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 TRAV41A0A0B4J266 112 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 NPIPB5A8MRT5 1133 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 SYNGR2O43760 224 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 FBXO24O75426 580 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 ACTL6BO94805 426 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 IGHG4P01861 327 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 CRYBA1P05813 215 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 OR13C7P0DN81 318 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 RNASE2P10153 161 aaKnown RBP7.41□□□□□ -1.22
RFX3-201ENST00000302303 PSMB6P28072 239 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 NKX2-1P43699 371 aaPredicted RBP7.41□□□□□ -1.22
RFX3-201ENST00000302303 BCAP31P51572 246 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 HIST2H2BDQ6DRA6 164 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 THOC7Q6I9Y2 204 aaKnown RBP7.41□□□□□ -1.22
RFX3-201ENST00000302303 UNQ5815/PRO19632Q6UWF5 114 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 ZNF329Q86UD4 541 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 OR5T1Q8NG75 326 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 PPP1R1CQ8WVI7 109 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 P2RX4Q99571 388 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 KLK15Q9H2R5 256 aa7.41□□□□□ -1.22
RFX3-201ENST00000302303 TRBV9A0A0B4J1U6 114 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 PMS2P5A8MQ11 134 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 BRI3O95415 125 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 PRH1P02810 166 aa7.4□□□□□ -1.22
RFX3-201ENST00000302303 PSMB8P28062 276 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms