RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 KIR2DL5AQ8N109 375 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 OR51G1Q8NGK1 321 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 RND1Q92730 232 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 RAB40CQ96S21 281 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 CLEC5AQ9NY25 188 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 C1QTNF9BB2RNN3 333 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.38□□□□□ -1.07
FOXN4-201ENST00000299162 THBS3P49746 956 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 CNN1P51911 297 aaKnown RBP8.38□□□□□ -1.07
FOXN4-201ENST00000299162 TAS2R30P59541 319 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 SELENOVP59797 346 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 PRAMEF5Q5TYX0 476 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 CCL17Q92583 94 aa8.38□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF430Q9H8G1 570 aaPredicted RBP8.38□□□□□ -1.07
FOXN4-201ENST00000299162 REG1BP48304 166 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF134P52741 427 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 HSPB9Q9BQS6 159 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 SCNM1Q9BWG6 230 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 QTRT1Q9BXR0 403 aaKnown RBP8.37□□□□□ -1.07
FOXN4-201ENST00000299162 TIMM8BQ9Y5J9 83 aaPredicted RBP8.37□□□□□ -1.07
FOXN4-201ENST00000299162 MALRD1Q5VYJ5 2156 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 HCFC1P51610 2035 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 TRBV6-6A0A0A6YYG2 114 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 TRAV3A0A0B4J244 114 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 PRRG2O14669 202 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 DLX1P56177 255 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 BRWD1-AS2P59051 145 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 TFF3Q07654 80 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 MMDQ15546 238 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 PRR31Q5SQ13 230 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 Q6ZS92 163 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 BAGE3Q86Y29 109 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 BAGE2Q86Y30 109 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 TXN2Q99757 166 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 PARLQ9H300 379 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 C11orf1Q9H5F2 150 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 PTPRBP23467 1997 aa8.37□□□□□ -1.07
FOXN4-201ENST00000299162 MBD3L4A6NDZ8 208 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 MBD3L3A6NE82 208 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 MBD3L5A6NJ08 208 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 B4DEV8 164 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 PAGE4O60829 102 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 IFNA1P01562 189 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 RIPPLY3P57055 190 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 HBG1P69891 147 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 HBG2P69892 147 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 SLC35B1P78383 322 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 SLC35E4Q6ICL7 350 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 STPG4Q8N801 248 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 MBD3L2Q8NHZ7 208 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 H1FXQ92522 213 aaKnown RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 VAMP8Q9BV40 100 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 DCHS2Q6V1P9 2916 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 RNF212BA8MTL3 300 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 IGLV1-44P01699 117 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 KITLGP21583 273 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 CDKN1AP38936 164 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 RPL23P62829 140 aaKnown RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 PNRC1Q12796 327 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF726P1Q15940 193 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 SRSF7Q16629 238 aaKnown RBP eCLIP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 GCSAMLQ5JQS6 135 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 NEUROG1Q92886 237 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 HEYLQ9NQ87 328 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 NAT8Q9UHE5 227 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 VAX2Q9UIW0 290 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 ACACBO00763 2458 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 OR9G9P0C7N8 305 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 PSMB3P49720 205 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 MSMO1Q15800 293 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 TIMM23BQ5SRD1 257 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 FAM90A1Q86YD7 464 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 GBGT1Q8N5D6 347 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 ZNF525Q8N782 197 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 C1orf162Q8NEQ5 155 aaPredicted RBP8.36□□□□□ -1.07
FOXN4-201ENST00000299162 SMDT1Q9H4I9 107 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 HES4Q9HCC6 221 aa8.36□□□□□ -1.07
FOXN4-201ENST00000299162 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 A0A0G2JNJ9 132 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 MMP23AO75900 390 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 LDLRAD2Q5SZI1 272 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 WDR73Q6P4I2 378 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 DOLPP1Q86YN1 238 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 ABHD12Q8N2K0 398 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 CMTM2Q8TAZ6 248 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 MANBALQ9NQG1 85 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.35□□□□□ -1.07
FOXN4-201ENST00000299162 Q9UFV3 132 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 IL19Q9UHD0 177 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 LRRC30A6NM36 301 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 CD40P25942 277 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 MEF2BQ02080 365 aaPredicted RBP8.35□□□□□ -1.07
FOXN4-201ENST00000299162 COL5A1-AS1Q5SY13 56 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 OR4A16Q8NH70 328 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 CIB3Q96Q77 187 aaPredicted RBP8.35□□□□□ -1.07
FOXN4-201ENST00000299162 TRGV8A0A0C4DH27 118 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 SRRM5B3KS81 715 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 PROP1O75360 226 aa8.35□□□□□ -1.07
FOXN4-201ENST00000299162 PMCHP20382 165 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms