RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 HSPE1P61604 102 aaKnown RBP12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 TMEM95Q3KNT9 176 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 CXorf66Q5JRM2 361 aaPredicted RBP12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 SLC35E3Q7Z769 313 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 Q8N2B8 174 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 C2orf50Q96LR7 162 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 PARP11Q9NR21 331 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 GSKIPQ9P0R6 139 aa12.47□□□□□ -0.41
CCDC90B-201ENST00000260054 TSPAN9O75954 239 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 IFNA17P01571 189 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 IL15RAQ13261 267 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 SPINK9Q5DT21 86 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 PRIMA1Q86XR5 153 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 LURAP1LQ8IV03 231 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 OR1L8Q8NGR8 309 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 NDUFA4L2Q9NRX3 87 aa12.46□□□□□ -0.41
CCDC90B-201ENST00000260054 MSGN1A6NI15 193 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 TEX22C9J3V5 150 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 KCNAB3O43448 404 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 APELAP0DMC3 54 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 HTR2BP41595 481 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 TNFRSF9Q07011 255 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 OR52E5Q8NH55 327 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 PDCD10Q9BUL8 212 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 HINT2Q9BX68 163 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 HSPB7Q9UBY9 170 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 LINC00527Q9UJ94 153 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 PRCDQ00LT1 54 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 PDLIM3Q53GG5 364 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 ASPHD1Q5U4P2 390 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 OR10W1Q8NGF6 305 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 SGMS2Q8NHU3 365 aa12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 NOL4LQ96MY1 436 aaPredicted RBP12.45□□□□□ -0.42
CCDC90B-201ENST00000260054 SCGB1D2O95969 90 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 IGF1P05019 195 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 NKX2-1P43699 371 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 SPCS3P61009 180 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 ID3Q02535 119 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 ARSJQ5FYB0 599 aaPredicted RBP12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 C11orf87Q6NUJ2 197 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 LFNGQ8NES3 379 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 MAGT1Q9H0U3 335 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 SERTAD4Q9NUC0 356 aa12.44□□□□□ -0.42
CCDC90B-201ENST00000260054 IGLC7A0M8Q6 106 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 FAM90A26D6RGX4 464 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 G3V318 75 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 AP4M1O00189 453 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 MBPP02686 304 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 AREGP15514 252 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 CRIP2P52943 208 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 WT1-ASQ06250 92 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 SRSF4Q08170 494 aaKnown RBP12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 ECSCRQ19T08 205 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 OR2T6Q8NHC8 308 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 HYLS1Q96M11 299 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 NMES1Q9C002 83 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 ZNF436Q9C0F3 470 aaPredicted RBP12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 RBKSQ9H477 322 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 WSB1Q9Y6I7 421 aa12.43□□□□□ -0.42
CCDC90B-201ENST00000260054 NDUFA7O95182 113 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 VDAC2P45880 294 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 C19orf54Q5BKX5 351 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 STPG2Q8N412 459 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 SUN5Q8TC36 379 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 C16orf95Q9H693 158 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 PLEKHA3Q9HB20 300 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 CACFD1Q9UGQ2 172 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 CEBPZOSA8MTT3 80 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 M6PRP20645 277 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 HOXA1P49639 335 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 CYCSP99999 105 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 RAB32Q13637 225 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 UNQ5815/PRO19632Q6UWF5 114 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 LINC01006Q8NI28 216 aa12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 RCL1Q9Y2P8 373 aaKnown RBP12.42□□□□□ -0.42
CCDC90B-201ENST00000260054 TRAV41A0A0B4J266 112 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 A0A1W2PN81 502 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 SYNGR2O43760 224 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 REG1AP05451 166 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 OR13C7P0DN81 318 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 CHRNA7P36544 502 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 AKIRIN2Q53H80 203 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 C19orf35Q6ZS72 473 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 CCDC28AQ8IWP9 274 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 DTD1Q8TEA8 209 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 PPP1R1CQ8WVI7 109 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 SRSF8Q9BRL6 282 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 ZNF580Q9UK33 172 aa12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
CCDC90B-201ENST00000260054 K7EPK0 472 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 SSSCA1O60232 199 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 GIPP09681 153 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 HKR1P10072 659 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 IAPPP10997 89 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 AP2S1P53680 142 aaPredicted RBP12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 S100A10P60903 97 aa12.4□□□□□ -0.42
CCDC90B-201ENST00000260054 TMEM267Q0VDI3 215 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms