RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 PRTN3P24158 256 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 HTR1DP28221 377 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 OPRK1P41145 380 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 MRPL41Q8IXM3 137 aaKnown RBP14.06□□□□□ -0.16
VRK1-201ENST00000216639 RPP25LQ8N5L8 163 aaKnown RBP14.06□□□□□ -0.16
VRK1-201ENST00000216639 KIR3DL3Q8N743 410 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 GNG13Q9P2W3 67 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 ABCA4P78363 2273 aa14.06□□□□□ -0.16
VRK1-201ENST00000216639 LY6LH3BQJ8 138 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 PRB3Q04118 309 aaPredicted RBP14.05□□□□□ -0.16
VRK1-201ENST00000216639 TEPPQ6URK8 271 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 RNF5Q99942 180 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 ZNF430Q9H8G1 570 aaPredicted RBP14.05□□□□□ -0.16
VRK1-201ENST00000216639 SIRT7Q9NRC8 400 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 PKD1L2Q7Z442 2459 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 ITPR1Q14643 2758 aa14.05□□□□□ -0.16
VRK1-201ENST00000216639 OVOL3O00110 214 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 IGKV1D-33P01593 117 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 IGKV1-33P01594 117 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 SUB1P53999 127 aaKnown RBP eCLIP14.04□□□□□ -0.168e-7■■■□□ 16.3
VRK1-201ENST00000216639 BSXQ3C1V8 233 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 SOHLH1Q5JUK2 328 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 MMD2Q8IY49 270 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 CLRN3Q8NCR9 226 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 DPM3Q9P2X0 92 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 MALRD1Q5VYJ5 2156 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 NBEAQ8NFP9 2946 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 LOC102723971A0A1B0GUV8 181 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 ACTL6BO94805 426 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 IGHV2-5P01817 119 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 OR13C7P0DN81 318 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 FGF8P55075 233 aaPredicted RBP14.04□□□□□ -0.16
VRK1-201ENST00000216639 PMS2P11Q13670 270 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 ICAM4Q14773 271 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 ARSJQ5FYB0 599 aaPredicted RBP14.04□□□□□ -0.16
VRK1-201ENST00000216639 TPTE2P1Q5T6R2 138 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 FAM122CQ6P4D5 195 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 RBMS3Q6XE24 437 aaKnown RBP14.04□□□□□ -0.16
VRK1-201ENST00000216639 SSX7Q7RTT5 188 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 RXFP4Q8TDU9 374 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 MGST2Q99735 147 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 SLC25A22Q9H936 323 aa14.04□□□□□ -0.16
VRK1-201ENST00000216639 LSM4Q9Y4Z0 139 aaKnown RBP14.04□□□□□ -0.16
VRK1-201ENST00000216639 RELNP78509 3460 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 SMG1Q96Q15 3661 aaKnown RBP14.03□□□□□ -0.16
VRK1-201ENST00000216639 ZFP92A6NM28 416 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 RNASE2P10153 161 aaKnown RBP14.03□□□□□ -0.16
VRK1-201ENST00000216639 BCL2P10415 239 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 MAS1LP35410 378 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 NPBWR1P48145 328 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 OR10W1Q8NGF6 305 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 GGTLC1Q9BX51 225 aa14.03□□□□□ -0.16
VRK1-201ENST00000216639 KLF2Q9Y5W3 355 aaPredicted RBP14.03□□□□□ -0.16
VRK1-201ENST00000216639 DNASE2O00115 360 aaPredicted RBP14.02□□□□□ -0.16
VRK1-201ENST00000216639 SRP19P09132 144 aaKnown RBP14.02□□□□□ -0.16
VRK1-201ENST00000216639 TAGLN2P37802 199 aaKnown RBP14.02□□□□□ -0.16
VRK1-201ENST00000216639 CDC34P49427 236 aaPredicted RBP14.02□□□□□ -0.16
VRK1-201ENST00000216639 PSG5Q15238 335 aa14.02□□□□□ -0.16
VRK1-201ENST00000216639 RAB24Q969Q5 203 aa14.02□□□□□ -0.16
VRK1-201ENST00000216639 RITA1Q96K30 269 aa14.02□□□□□ -0.16
VRK1-201ENST00000216639 PXMP4Q9Y6I8 212 aa14.02□□□□□ -0.16
VRK1-201ENST00000216639 A0A1W2PPI3 338 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 A0A1W2PPV4 95 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 PDLIM4P50479 330 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 PRSS8Q16651 343 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 CACNG8Q8WXS5 425 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 P2RX4Q99571 388 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 VAX2Q9UIW0 290 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 TPRP12270 2363 aaKnown RBP14.01□□□□□ -0.17
VRK1-201ENST00000216639 ODF3BA8MYP8 253 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 SEC14L6B5MCN3 397 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 TSPAN4O14817 238 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 NUPL2O15504 423 aaKnown RBP14.01□□□□□ -0.17
VRK1-201ENST00000216639 GPX4P36969 197 aaPredicted RBP14.01□□□□□ -0.17
VRK1-201ENST00000216639 TMEM144Q7Z5S9 345 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 RNASEH2CQ8TDP1 164 aaKnown RBP14.01□□□□□ -0.17
VRK1-201ENST00000216639 SPOCK3Q9BQ16 436 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 SIGLEC9Q9Y336 463 aa14.01□□□□□ -0.17
VRK1-201ENST00000216639 FAM74A7A6NL05 159 aa14□□□□□ -0.17
VRK1-201ENST00000216639 CRYGBP07316 175 aa14□□□□□ -0.17
VRK1-201ENST00000216639 ZFP36P26651 326 aaKnown RBP14□□□□□ -0.17
VRK1-201ENST00000216639 RPL29P47914 159 aaKnown RBP14□□□□□ -0.17
VRK1-201ENST00000216639 B2MP61769 119 aa14□□□□□ -0.17
VRK1-201ENST00000216639 CD69Q07108 199 aa14□□□□□ -0.17
VRK1-201ENST00000216639 FAM74A3Q4VXF1 159 aa14□□□□□ -0.17
VRK1-201ENST00000216639 MIC13Q5XKP0 118 aa14□□□□□ -0.17
VRK1-201ENST00000216639 VMO1Q7Z5L0 202 aa14□□□□□ -0.17
VRK1-201ENST00000216639 CCL19Q99731 98 aa14□□□□□ -0.17
VRK1-201ENST00000216639 BPESC1Q9GZL8 116 aa14□□□□□ -0.17
VRK1-201ENST00000216639 TPSG1Q9NRR2 321 aa14□□□□□ -0.17
VRK1-201ENST00000216639 METTL1Q9UBP6 276 aaKnown RBP14□□□□□ -0.17
VRK1-201ENST00000216639 M0R036 132 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 TIMM23O14925 209 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 RPL27AP46776 148 aaKnown RBP13.99□□□□□ -0.17
VRK1-201ENST00000216639 PSMB3P49720 205 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 WT1-ASQ06250 92 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 TNXAQ16473 311 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 C10orf55Q5SWW7 151 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 CCDC144NLQ6NUI1 221 aa13.99□□□□□ -0.17
VRK1-201ENST00000216639 PPP1R27Q86WC6 154 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms