RNA–Protein interactions for RNA: ENSMUST00000066432.11

Scn3a-201, Transcript of Sodium channel protein, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn3a, Length 9,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3a-201ENSMUST00000066432 Sdk2Q6V4S5 2176 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Ighv9-2A0A0B4J1J4 117 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Birc7A2AWP0 285 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr609E9Q4X7 319 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Hoxa1P09022 331 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cd5P13379 494 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Sec14l3Q5SQ27 401 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Aqp3Q8R2N1 292 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr1491Q8VEZ5 319 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr303Q8VFP0 319 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Srxn1Q9D975 136 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Zfp109A0A0U1RPC5 652 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Sult2a5K7N6K9 285 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Hoxb3P09026 433 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Hoxa6P09092 232 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Obox7Q4KL20 218 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Sf3a2Q62203 475 aaKnown RBP6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Msrb2Q78J03 175 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr1242Q8VGM6 306 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Adipor1Q91VH1 375 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Flywch2Q9CQE9 139 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr1116E9PXB8 307 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr194L7N1Y8 306 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cd79bP15530 228 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 AhsgP29699 345 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Mmp9P41245 730 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cln5Q3UMW8 341 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Oxgr1Q6IYF8 337 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr1204Q7TR10 309 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 PimregQ8BFY7 231 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr1239Q8VGM8 305 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Rnaseh2cQ9CQ18 166 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Rnf151Q9CQ29 239 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Ntn4Q9JI33 628 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Adam11Q9R1V4 773 aa6.37□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Zfp979A2A799 407 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gm10269G3UWD7 123 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gm26965M0QWH4 86 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Tnfaip6O08859 275 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 ElobP62869 118 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr963Q7TRA9 311 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Rcc1lQ9CYF5 461 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Mpc2Q9D023 127 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Q9DAL9 119 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Scgb1b12A0A087WP21 93 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Trbv29A0A0G2LB96 114 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gm609E9Q573 300 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Vmn1r128L7N2B4 307 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr12Q60894 333 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Fam174bQ8K064 153 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Pla2g16Q8R3U1 162 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Nfam1Q8R4V1 264 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Dnmt3lQ9CWR8 421 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 RhcgQ9QXP0 498 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Fut1O09160 376 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 P01809 118 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr259Q7TS20 312 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Abhd12Q99LR1 398 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 3100002H09RikQ9CXW6 140 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cyb5r3Q9DCN2 301 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Dennd4cA6H8H2 1906 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gm13083A2AGW5 501 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gm10112D3YWP5 117 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Prr23a1G3UW32 258 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cldn34c2J3QNM1 233 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr635K7N6B1 321 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gnb4P29387 340 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Fgf8P37237 268 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Zfp663Q6NXM6 656 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Cldn34c1Q8K193 234 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Uqcc3Q8K2T4 89 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Map1lc3bQ9CQV6 125 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Igkv6-25A0A140T8N7 115 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Ctxnd1A0A1B0GST9 59 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Gabra1P62812 455 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr16Q62007 309 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Zfp87Q8K2A4 540 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 DnlzQ9D113 177 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Csrp2P97314 193 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Spred3Q6P6N5 408 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Agpat2Q8K3K7 278 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 H1fooQ8VIK3 304 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Glipr1Q9CWG1 255 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Mllt1Q9ERL0 547 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Ldb3Q9JKS4 723 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 P18524 117 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Rps20P60867 119 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Neil2Q6R2P8 329 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr153Q7TR48 307 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Lhfpl6Q8BM86 200 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Lin28aQ8K3Y3 209 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Mic13Q8R404 119 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Ssmem1Q9D9Y8 244 aa6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Slc25a20Q9Z2Z6 301 aaKnown RBP6.36□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Zfp942B8JJA7 486 aa6.35□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Rag2P21784 527 aa6.35□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Csrp1P97315 193 aaKnown RBP6.35□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Tmem184aQ3UFJ6 425 aa6.35□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Usf1Q61069 310 aa6.35□□□□□ -1.39
Scn3a-201ENSMUST00000066432 Olfr876Q7TRE4 310 aa6.35□□□□□ -1.39
Retrieved 100 of 22,080 RNA–protein pairs in 35.9 ms