RNA–Protein interactions for RNA: ENSMUST00000033088.7

Rnf40-201, Transcript of E3 ubiquitin-protein ligase BRE1B, mousemouse

TSL 5 BASIC

Gene Rnf40, Length 3,906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf40-201ENSMUST00000033088 IslrQ6GU68 428 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 H2-M10.3Q85ZW6 330 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Alkbh6Q8K2U2 238 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr736Q8VFT6 312 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 St6galnac6Q9JM95 333 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Ndufa7Q9Z1P6 113 aaKnown RBP9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm12728V9GX31 77 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 RlfA2A7F4 1918 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Fbxw27A0A1D5RLF0 466 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Nxpe5E0CX47 564 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Efna4O08542 206 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 P01806 116 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Hist1h1dP43277 221 aaKnown RBP9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Mettl4Q3U034 471 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Wdr34Q5U4F6 535 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr987Q7TRA2 309 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gucd1Q8BZI6 239 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gjc3Q921C1 269 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Abhd12Q99LR1 398 aaKnown RBP9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Fzr1Q9R1K5 493 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Usf3B2RUQ2 2221 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm36864A0A1Y7VJE6 447 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 4930435E12RikA6X8Z9 381 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr1053L7MU59 313 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 RelP15307 587 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 H2-DMaP28078 261 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Klk1b26P36369 261 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Bmpr1bP36898 502 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Dnase2P56542 353 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Jsrp1Q3MI48 332 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Cnep1r1Q3UJ81 125 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 SepsecsQ6P6M7 504 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Cd200r4Q6XJV4 270 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr112Q8C0S2 320 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Pitpnc1Q8K4R4 332 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 EpcamQ99JW5 315 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm10762Q9CZN6 115 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Tmem50bQ9D1X9 158 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Tnfrsf19Q9JLL3 416 aa9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 StrapQ9Z1Z2 350 aaKnown RBP9.31□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Baz2aQ91YE5 1889 aaKnown RBP9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Igkv17-127A0A0G2JDN5 117 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm14412A2ARR7 526 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm14597A2CFG5 200 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Zfp764E9QAP1 431 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Zfand5O88878 213 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Cd3eP22646 189 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr142Q60881 305 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Rnf144bQ8BKD6 301 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 4930474N05RikQ8BVR5 218 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Vmn1r235Q8R297 328 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr1038Q8VGS1 319 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Nudt16l1Q8VHN8 211 aaKnown RBP9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gje1Q9CX92 205 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Xrcc3Q9CXE6 349 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Sun5Q9DA32 373 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Szt2A2A9C3 3431 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 AU041133A0A0J9YVH3 498 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Tcl1aP56280 116 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 NptnP97300 397 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Tmem184aQ3UFJ6 425 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 A3galt2Q3V1N9 370 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm5447Q8BPB2 115 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Defa22Q8C1N8 93 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm9999Q8C5Y2 53 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Rhbdd2Q8VEK2 361 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr51Q8VGG9 307 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Slc35d1A2AKQ0 355 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 AgmatA2AS89 358 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Trav13d-3J3QMG8 112 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Wdr1O88342 606 aaKnown RBP9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Foxh1O88621 401 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Ifna6P07350 189 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Plppr1Q8BFZ2 325 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Rps19bp1Q8C6B9 143 aaKnown RBP9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Tmem212Q8C6V3 187 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Prss45Q8K4I7 317 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr1457Q8VFK3 317 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 NmuQ9QXK8 174 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Mfap5Q9QZJ6 164 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Psmb2Q9R1P3 201 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gdf15Q9Z0J7 303 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Abhd16aQ9Z1Q2 558 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm14214V9GX35 225 aa9.3□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Exph5Q0VAV2 1960 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Eml5Q8BQM8 1977 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Igkv9-124A0A0G2JDR3 117 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Gm5225J3QPL3 108 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 GzmfP08883 248 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Hoxa5P09021 270 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Cks2P56390 79 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 NrtnP97463 195 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Poc1bQ8BHD1 476 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Znf385aQ8VD12 386 aaKnown RBP9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Olfr124Q8VGW6 315 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Borcs7Q9CRC6 105 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 4933402D24RikQ9D4D3 167 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 1700069L16RikQ9D9H5 109 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Ssmem1Q9D9Y8 244 aa9.29□□□□□ -0.92
Rnf40-201ENSMUST00000033088 Btbd17Q9DB72 478 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 28 ms