RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Olfr1239Q8VGM8 305 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Mrpl14Q9D1I6 145 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Prss21Q9JHJ7 324 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cst10Q9JM84 148 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 PpiaP17742 164 aaKnown RBP11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Tnfrsf1aP25118 454 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 CenptQ3TJM4 515 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Zbtb49Q8BXX2 756 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1427Q8VFU9 311 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 MrgprdQ91ZB8 321 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Neurl1Q923S6 574 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Mrpl30Q9D7N6 160 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fbxw4Q9JMJ2 410 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Xcr1Q9R0M1 322 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm13083A2AGW5 501 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Prss2P07146 246 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Spam1P48794 512 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Tcl1b1P56840 116 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm614Q3V2K1 191 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rab35Q6PHN9 201 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ovch2Q7M761 609 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 C730034F03RikQ8BGL5 111 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cdc42ep2Q8JZX9 214 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr57Q8VGU7 319 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Exph5Q0VAV2 1960 aa11.08□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ralgapa1Q6GYP7 2035 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Mgst2A2RST1 147 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ren1P06281 402 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rplp1P47955 114 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Hist1h3aP68433 136 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cfhr1Q61406 343 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Bud31Q6PGH1 103 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr1212Q7TR08 311 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Neurl3Q8CJC5 254 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Neil3Q8K203 606 aaKnown RBP11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ntng2Q8R4F1 589 aaKnown RBP11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ifi27l2bQ8VC49 283 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Egln1Q91YE3 400 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Q9DAS2 200 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr934Q9EQ87 310 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Pdcd1lg2Q9WUL5 247 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Pard6aQ9Z101 346 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm28285A0A087WQ54 102 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm4565A0A140LJ87 301 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 A0A286YD13 301 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm6176J3QK59 301 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Adcyap1O70176 175 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fgf11P70378 225 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ext1P97464 746 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm4567Q3UTA8 301 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Nmes1Q810Q5 83 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 RetnlgQ8K426 117 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr624F8VQI7 308 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Heatr1G3X9B1 2143 aaKnown RBP11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm10428J3QNV7 132 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Mamld1P0C6A2 803 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Csrp2P97314 193 aaKnown RBP11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Rbp2Q08652 134 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Znf250Q7TNU6 535 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr907Q7TRC7 310 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Q80UB0 333 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Tm2d3Q8BJ83 261 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Scgb3a2Q920H1 91 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Eaf1Q9D4C5 268 aa11.07□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr556E9Q549 324 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 D430019H16RikJ3QPM6 83 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Il2raP01590 268 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Zfp11P10751 647 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Pax6P63015 422 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ear1P97426 155 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cited1P97769 203 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ucn3Q924A4 164 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Timm8a1Q9WVA2 97 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm15292L7N231 93 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 TectbO08524 329 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cdx1P18111 268 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Drd3P30728 446 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 KrasP32883 189 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Ccl7Q03366 97 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cd200r4Q6XJV4 270 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Slc22a27Q76M72 551 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm10309Q8C648 119 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Flywch2Q9CQE9 139 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Slc50a1Q9CXK4 221 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Atg101Q9D8Z6 218 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Sun5Q9DA32 373 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Fgf16Q9ESL8 207 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Lama2Q60675 3118 aaKnown RBP11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 SdcbpO08992 299 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Guca2aP33680 116 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Wnt10aP70701 417 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 CdiptQ8VDP6 213 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Olfr279Q8VFD8 310 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cotl1Q9CQI6 142 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Cyc1Q9D0M3 325 aaKnown RBP11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Dtwd2Q9D0U1 298 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Sdf2l1Q9ESP1 221 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Scgb1b10A0A087WPW0 93 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Vmn1r34G3XA52 309 aa11.06□□□□□ -0.64
Clcn3-201ENSMUST00000004430 Gm20821J3QPJ2 227 aa11.06□□□□□ -0.64
Retrieved 100 of 22,080 RNA–protein pairs in 73.5 ms