RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Tcl1b1P56840 116 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 S100a3P62818 101 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm21292Q78EE2 227 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Exosc2Q8VBV3 293 aaKnown RBP14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Mus81Q91ZJ0 551 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Tmem107Q9CPV0 140 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Sun5Q9DA32 373 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Vstm2bQ9JME9 285 aa14.04□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm10638F6QEG2 257 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1220F7BL62 311 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Vmn1r34G3XA52 309 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Pfdn2O70591 154 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Rab5cP35278 216 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Vamp2P63044 116 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 ShbgP97497 403 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Rhox4gQ2MDF7 205 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Rhox4dQ2MDG0 205 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Rhox4eQ504P9 205 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 PiglQ5SX19 252 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Dll1Q61483 722 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 LgalslbQ7TPX9 165 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Ssxb2Q8C5Z3 165 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 BC049762Q8C601 163 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 RhovQ8VDU1 236 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Rhox4bQ9JI43 205 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm29049A0A087WSM5 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Samt1A2BED8 237 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm15140A2BEE3 237 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Siglec15A7E1W8 342 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm21863J3KMP8 111 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm21118J3QPK8 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Cd46O88174 365 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Srsf6Q3TWW8 339 aaKnown RBP14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Fbxo7Q3U7U3 523 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20909Q5FWB5 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20852Q5M8R5 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Cd55bQ61476 407 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Ifna15Q61718 190 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20917Q62457 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20809Q62458 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20865Q62460 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gpr6Q6YNI2 363 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20738Q810R8 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 FarsaQ8C0C7 508 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Q8CDS7 251 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Hspa12aQ8K0U4 675 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr1239Q8VGM8 305 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 FrkQ922K9 512 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm20806Q9D9T3 227 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Hspb9Q9DAM3 168 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 SrfQ9JM73 504 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Hils1Q9QYL0 170 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Syt7Q9R0N7 403 aa14.03□□□□□ -0.16
Shh-201ENSMUST00000002708 Tcrg-C4A0A075B6C7 190 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm28285A0A087WQ54 102 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 2010315B03RikJ3QK55 433 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Foxh1O88621 401 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Gm5127Q3UQH6 212 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Cd200r1lQ6XJV6 249 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Mr1Q8HWB0 341 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Rbpms2Q8VC52 206 aaKnown RBP14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Olfr980Q8VH08 310 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Stard4Q99JV5 224 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Q9DAL9 119 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Wnt16Q9QYS1 364 aa14.02□□□□□ -0.16
Shh-201ENSMUST00000002708 Map1bP14873 2464 aaKnown RBP14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Ighv5-12A0A075B5Q4 117 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Vmn1r204I7HIK1 302 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Fpr2O88536 351 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Hist1h2bmP10854 126 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Npbwr1P49681 329 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm1527Q3V0P3 650 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Klf3Q60980 344 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Hist1h2bhQ64478 126 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Hist2h2bbQ64525 126 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Iqcf4Q6P8Y2 204 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Hist1h2bcQ6ZWY9 126 aaKnown RBP14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Zfp3Q8BLB0 497 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Foxn4Q8K3Q3 521 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Ntng2Q8R4F1 589 aaKnown RBP14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr181Q8VGQ7 317 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 MrgprdQ91ZB8 321 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Vkorc1Q9CRC0 161 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Rnase6Q9D244 153 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 Zfp111Q9R164 701 aa14.02□□□□□ -0.17
Shh-201ENSMUST00000002708 A0A1Y7VIT9 351 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 3110082J24RikF6Z6Z2 108 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm20918J3QN17 227 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Pitx3O35160 302 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Tesk1O70146 627 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Hoxa5P09021 270 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Foxa2P35583 459 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Il11P47873 199 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Rab2aP53994 212 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Ear1P97426 155 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 AgaQ64191 346 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Gm5447Q8BPB2 115 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 SpartQ8R1X6 671 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr113Q8VEU4 312 aa14.01□□□□□ -0.17
Shh-201ENSMUST00000002708 Olfr1030Q8VFL5 318 aa14.01□□□□□ -0.17
Retrieved 100 of 22,080 RNA–protein pairs in 44.8 ms