RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 LHX4Q969G2 390 aa6.31□□□□□ -1.4
NEK3-207ENST00000617054 FLYWCH2Q96CP2 140 aaKnown RBP6.31□□□□□ -1.4
NEK3-207ENST00000617054 PATZ1Q9HBE1 687 aaKnown RBP6.31□□□□□ -1.4
NEK3-207ENST00000617054 GAB2Q9UQC2 676 aa6.31□□□□□ -1.4
NEK3-207ENST00000617054 OR51B2Q9Y5P1 312 aa6.31□□□□□ -1.4
NEK3-207ENST00000617054 SESN1Q9Y6P5 492 aa6.31□□□□□ -1.4
NEK3-207ENST00000617054 C15orf62A8K5M9 175 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 PMS2P5A8MQ11 134 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 RBFOX2O43251 390 aaKnown RBP eCLIP6.3□□□□□ -1.4
NEK3-207ENST00000617054 SLC25A17O43808 307 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 IGHV4-39P01824 125 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 SEC11BP0C7V7 166 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 C19orf35Q6ZS72 473 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 PCGF1Q9BSM1 259 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 TREM1Q9NP99 234 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 ABCA2Q9BZC7 2435 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 APCP25054 2843 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 CSPG4Q6UVK1 2322 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 C15orf61A6NNL5 157 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 BUB1B-PAK6H3BSN5 160 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 IFNA5P01569 189 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 ARG1P05089 322 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 LIPFP07098 398 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 RAB13P51153 203 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 ATRAIDQ6UW56 229 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 OR10P1Q8NGE3 313 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 OR5AN1Q8NGI8 311 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 INSIG2Q9Y5U4 225 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 TEX50A0A1B0GTY4 177 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 A0A1W2PPH5 198 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 FAM90A26D6RGX4 464 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 NUPL2O15504 423 aaKnown RBP6.3□□□□□ -1.4
NEK3-207ENST00000617054 HRASP01112 189 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 IGLV1-47P01700 117 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 IFNA4P05014 189 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 REG1AP05451 166 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 EFNA4P52798 201 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 FGF8P55075 233 aaPredicted RBP6.3□□□□□ -1.4
NEK3-207ENST00000617054 SPCS3P61009 180 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 HBG1P69891 147 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 HBG2P69892 147 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 DEFA5Q01523 94 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 HLA-DRB5Q30154 266 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 BTNL8Q6UX41 500 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 SSX7Q7RTT5 188 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 OR10A7Q8NGE5 316 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 OR4P4Q8NGL7 312 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 SCGB1C1Q8TD33 95 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 RARRES2Q99969 163 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 CLEC7AQ9BXN2 247 aa6.3□□□□□ -1.4
NEK3-207ENST00000617054 PIGBOS1A0A0B4J2F0 54 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 TSPAN15O95858 294 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 GHRHP01286 108 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 APOA2P02652 100 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 KIR2DS2P43631 304 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 VDAC2P45880 294 aaPredicted RBP6.29□□□□□ -1.4
NEK3-207ENST00000617054 LGALS4P56470 323 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 HSD17B13Q7Z5P4 300 aaPredicted RBP6.29□□□□□ -1.4
NEK3-207ENST00000617054 LRRC20Q8TCA0 184 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 SFT2D1Q8WV19 159 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 TMEM186Q96B77 213 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 PERPQ96FX8 193 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 HIPK2Q9H2X6 1198 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 TMEM14BQ9NUH8 114 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 NAV2Q8IVL1 2488 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 ADCYAP1P18509 176 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 TAS2R30P59541 319 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 SSX2Q16385 188 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 GCSAMLQ5JQS6 135 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 ETV3LQ6ZN32 361 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 RAB39BQ96DA2 213 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 ADTRPQ96IZ2 230 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 TSNAXQ99598 290 aaKnown RBP6.29□□□□□ -1.4
NEK3-207ENST00000617054 CCL19Q99731 98 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 WDR61Q9GZS3 305 aaKnown RBP6.29□□□□□ -1.4
NEK3-207ENST00000617054 RPRMQ9NS64 109 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 MED9Q9NWA0 146 aa6.29□□□□□ -1.4
NEK3-207ENST00000617054 IGHV3OR16-10A0A075B7F0 116 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 A0A087X0M5 115 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 IGHV1-3A0A0C4DH29 117 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 A0A1B0GX30 115 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 UPK2O00526 184 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CA2P00918 260 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 IGKV1D-33P01593 117 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 IGKV1-33P01594 117 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 FBP1P09467 338 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 M6PRP20645 277 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 HSPE1P61604 102 aaKnown RBP6.28□□□□□ -1.4
NEK3-207ENST00000617054 GNB1P62873 340 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 LRRC75BQ2VPJ9 315 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 LCN15Q6UWW0 184 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 LY6G5BQ8NDX9 201 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 OR4C13Q8NGP0 309 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 TAF15Q92804 592 aaKnown RBP eCLIP6.28□□□□□ -1.4
NEK3-207ENST00000617054 RPEQ96AT9 228 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 EIF5A2Q9GZV4 153 aaKnown RBP6.28□□□□□ -1.4
NEK3-207ENST00000617054 TEX15Q9BXT5 2789 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 CCDC168Q8NDH2 2452 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 DFFBO76075 338 aa6.28□□□□□ -1.4
NEK3-207ENST00000617054 KBTBD11O94819 623 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms