RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 UBE2V1Q13404 147 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 MUC21Q5SSG8 566 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 A0A087WWC5 75 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 FOXL2P58012 376 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 NOTCH2Q04721 2471 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 KBTBD11-OT1A0A1B0GTJ5 212 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 RAB9AP51151 201 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM170AQ8WVE7 144 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 DNASE2BQ8WZ79 361 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 CACNA1AO00555 2505 aa7.48□□□□□ -1.21
CSMD1-216ENST00000602557 TRAV14DV4A0A0A6YYC5 116 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 J3QR06 171 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 DNAL4O96015 105 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 KCNMB1Q16558 191 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 PRR31Q5SQ13 230 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM186Q96B77 213 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 TMEM106BQ9NUM4 274 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CGB1A6NKQ9 187 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 COLCA2A8K830 154 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 TNFSF13O75888 250 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 C1QL4Q86Z23 238 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 LOC285556D6RIA3 1793 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 APOHP02749 345 aaPredicted RBP7.47□□□□□ -1.21
CSMD1-216ENST00000602557 ORAOV1Q8WV07 137 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 AQP3Q92482 292 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 NCOR1P1Q9H4R4 102 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 G6PC2Q9NQR9 355 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 OR11H12B2RN74 326 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 RPL36A-HNRNPH2H7BZ11 118 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CXCL1P09341 107 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 VAX1Q5SQQ9 334 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 OR11H1Q8NG94 326 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 OR11H2Q8NH07 326 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CRISPLD2Q9H0B8 497 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 EML6Q6ZMW3 1958 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CENPVL1A0A0U1RR11 272 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CD8AP01732 235 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 DLX6P56179 175 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 ASCL5Q7RTU5 278 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 NCKAP5O14513 1909 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 SSTR5P35346 364 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 PYY3Q5JQD4 70 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CRIM1Q9NZV1 1036 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 SCO2A0A1W2PP80 73 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 HYPMO75409 117 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 C19orf54Q5BKX5 351 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 OR2K2Q8NGT1 345 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 SRSF12Q8WXF0 261 aaKnown RBP7.47□□□□□ -1.21
CSMD1-216ENST00000602557 PRTN3P24158 256 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 FADS6Q8N9I5 356 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 CLDND2Q8NHS1 167 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 TRBV5-3A0A0A0MS03 114 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 ACACBO00763 2458 aa7.47□□□□□ -1.21
CSMD1-216ENST00000602557 ID1P41134 155 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 RNFT1Q5M7Z0 435 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 ADAMTSL5Q6ZMM2 481 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 ZNHIT1O43257 154 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 HEPN1Q6WQI6 88 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 REG4Q9BYZ8 158 aa7.46□□□□□ -1.21
CSMD1-216ENST00000602557 RPS11P62280 158 aaKnown RBP eCLIP7.46□□□□□ -1.21
CSMD1-216ENST00000602557 HBBP68871 147 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 GAGE13Q4V321 117 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 OCIAD2Q56VL3 154 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 GZMHP20718 246 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 GCHFRP30047 84 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 MRPL52Q86TS9 123 aaKnown RBP7.46□□□□□ -1.22
CSMD1-216ENST00000602557 APOBEC4Q8WW27 367 aaKnown RBP7.46□□□□□ -1.22
CSMD1-216ENST00000602557 IL36BQ9NZH7 164 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 LOC105371242A0A075B767 164 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 PPIAL4CA0A0B4J2A2 164 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 A0A0G2JLM5 398 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 H0Y980 276 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 CLDN14O95500 239 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 PPIAL4GP0DN37 164 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 FBXW9Q5XUX1 488 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF721Q8TF20 911 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 VCX2Q9H322 139 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 RPRMQ9NS64 109 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 ANAPC1Q9H1A4 1944 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 ZIC3O60481 467 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 LSM4Q9Y4Z0 139 aaKnown RBP7.46□□□□□ -1.22
CSMD1-216ENST00000602557 A0A087X0K7 114 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 CA11O75493 328 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 HCP5Q6MZN7 132 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 TPRX1Q8N7U7 411 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 PIMREGQ9BSJ6 248 aa7.46□□□□□ -1.22
CSMD1-216ENST00000602557 IGKV1D-16P01601 117 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 ZNF441Q8N8Z8 693 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 GPR146Q96CH1 333 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 UCP2P55851 309 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 TTC9CQ8N5M4 171 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 ABHD14BQ96IU4 210 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 DSPPQ9NZW4 1301 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 A0A1W2PPV9 198 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 OR13C6PQ8NH95 151 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 MRAPQ8TCY5 172 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 GEMIN7Q9H840 131 aaKnown RBP7.45□□□□□ -1.22
CSMD1-216ENST00000602557 PLSCR2Q9NRY7 297 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 CEACAM18A8MTB9 384 aa7.45□□□□□ -1.22
CSMD1-216ENST00000602557 UPK3AO75631 287 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms