RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 A0A0U1RQK1 487 aa19.93■□□□□ 0.78
RFX1-205ENST00000589239 RBFOX2O43251 390 aaKnown RBP eCLIP19.93■□□□□ 0.78
RFX1-205ENST00000589239 SMR3AQ99954 134 aa19.93■□□□□ 0.78
RFX1-205ENST00000589239 OR51M1Q9H341 326 aa19.93■□□□□ 0.78
RFX1-205ENST00000589239 FAM212BQ9NTI7 297 aaPredicted RBP19.93■□□□□ 0.78
RFX1-205ENST00000589239 FAM157CP0CG43 387 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 CCDC144NLQ6NUI1 221 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 SPNS3Q6ZMD2 512 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 C15orf54Q8N8G6 183 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 TMEM231Q9H6L2 316 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 SMCO4Q9NRQ5 59 aa19.92■□□□□ 0.78
RFX1-205ENST00000589239 OOSP1A8MZH6 123 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 C1orf196B1AJZ1 125 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 HPRT1P00492 218 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 PSMB6P28072 239 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 SMCO1Q147U7 214 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 CFHR4Q92496 578 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 WASHC3Q9Y3C0 194 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 KRASP01116 189 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 CD24P25063 80 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 IL22RA2Q969J5 263 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 NIT2Q9NQR4 276 aa19.91■□□□□ 0.78
RFX1-205ENST00000589239 FSHBP01225 129 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 S100PP25815 95 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 MC5RP33032 325 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 G6PCP35575 357 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 RBMS3Q6XE24 437 aaKnown RBP19.9■□□□□ 0.78
RFX1-205ENST00000589239 PDPNQ86YL7 162 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 TMED6Q8WW62 240 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 PLEKHA2Q9HB19 425 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 CYTL1Q9NRR1 136 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 SONP18583 2426 aaKnown RBP19.9■□□□□ 0.78
RFX1-205ENST00000589239 IGKV1-5P01602 117 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 CAV2P51636 162 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 VKORC1L1Q8N0U8 176 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 C22orf15Q8WYQ4 148 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 DCUN1D4Q92564 292 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 SAT2Q96F10 170 aaPredicted RBP19.9■□□□□ 0.78
RFX1-205ENST00000589239 RAB18Q9NP72 206 aa19.9■□□□□ 0.78
RFX1-205ENST00000589239 ZNF705EA8MWA4 302 aaPredicted RBP19.89■□□□□ 0.77
RFX1-205ENST00000589239 S100A6P06703 90 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 RNF212Q495C1 297 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 GGNBP1Q5YKI7 109 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 IL17RELQ6ZVW7 336 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 FLYWCH2Q96CP2 140 aaKnown RBP19.89■□□□□ 0.77
RFX1-205ENST00000589239 RITA1Q96K30 269 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 YAE1D1Q9NRH1 226 aa19.89■□□□□ 0.77
RFX1-205ENST00000589239 GATCO43716 136 aaKnown RBP19.88■□□□□ 0.77
RFX1-205ENST00000589239 OR4C13Q8NGP0 309 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 NMES1Q9C002 83 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 FAM96BQ9Y3D0 163 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 MXRA5Q9NR99 2828 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 A0A0G2JRQ6 117 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 C13orf42A0A1B0GVH6 325 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 MARCH11A6NNE9 402 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 VDAC1P21796 283 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 IZUMO4Q1ZYL8 232 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 SSX9Q7RTT3 188 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 R3HDM4Q96D70 268 aa19.88■□□□□ 0.77
RFX1-205ENST00000589239 SRRM4A7MD48 611 aaKnown RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 VENTXO95231 258 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 FBLN7Q53RD9 439 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 FAM120AOSQ5T036 256 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 BCL6BQ8N143 479 aaPredicted RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 RNASE11Q8TAA1 199 aaKnown RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 HARBI1Q96MB7 349 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 TMED3Q9Y3Q3 217 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 HIVEP1P15822 2718 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 ANK3Q12955 4377 aaKnown RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 IGKV1D-33P01593 117 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 IGKV1-33P01594 117 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 NQO2P16083 231 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 CD1BP29016 333 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 CYCSP99999 105 aaKnown RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 TMEM177Q53S58 311 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 SMIM8Q96KF7 97 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 OR10C1Q96KK4 312 aa19.87■□□□□ 0.77
RFX1-205ENST00000589239 METTL1Q9UBP6 276 aaKnown RBP19.87■□□□□ 0.77
RFX1-205ENST00000589239 C5orf51A6NDU8 294 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 IFNA21P01568 189 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 SFTA3P0C7M3 94 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 BPIFB3P59826 476 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 RPS16P62249 146 aaKnown RBP19.86■□□□□ 0.77
RFX1-205ENST00000589239 NMSQ5H8A3 153 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 OSR1Q8TAX0 266 aaPredicted RBP19.86■□□□□ 0.77
RFX1-205ENST00000589239 RRNAD1Q96FB5 475 aaKnown RBP19.86■□□□□ 0.77
RFX1-205ENST00000589239 TMUB1Q9BVT8 246 aa19.86■□□□□ 0.77
RFX1-205ENST00000589239 DUXBA0A1W2PPF3 345 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 KCNAB3O43448 404 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 SNRNP70P08621 437 aaKnown RBP19.85■□□□□ 0.77
RFX1-205ENST00000589239 RHOVQ96L33 236 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 CD99P14209 185 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 HNF4GQ14541 408 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 HIST1H2BAQ96A08 127 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 RNF126Q9BV68 326 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 MEGF9Q9H1U4 602 aa19.85■□□□□ 0.77
RFX1-205ENST00000589239 MDFIC2A0A1B0GVS7 189 aa19.84■□□□□ 0.77
RFX1-205ENST00000589239 FBP1P09467 338 aa19.84■□□□□ 0.77
RFX1-205ENST00000589239 HES1Q14469 280 aa19.84■□□□□ 0.77
RFX1-205ENST00000589239 LSM10Q969L4 123 aaKnown RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms