RNA–Protein interactions for RNA: ENST00000573895.1

ABR-223, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 3

Gene ABR, Length 1,010 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-223	ENST00000573895	SPIN2B	Q9BPZ2	258 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	PLSCR3	Q9NRY6	295 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	MGAT4C	Q9UBM8	478 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	CACFD1	Q9UGQ2	172 aa		11.35	□□□□□ -0.59
ABR-223	ENST00000573895	IGHV3-72	A0A0B4J1Y9	119 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895		A0A1B0GU03	582 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	IGKV1-5	P01602	117 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	AKR1C2	P52895	323 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	FCN2	Q15485	313 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	NSUN5P1	Q3KNT7	163 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	NMS	Q5H8A3	153 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	TEX45	Q8NA69	505 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	DMBX1	Q8NFW5	382 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	OR4X2	Q8NGF9	303 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	OR4A5	Q8NH83	315 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	C2orf50	Q96LR7	162 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	HARBI1	Q96MB7	349 aa		11.34	□□□□□ -0.59
ABR-223	ENST00000573895	TSSC4	Q9Y5U2	329 aa	Predicted RBP	11.34	□□□□□ -0.59
ABR-223	ENST00000573895	TG	P01266	2768 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	C13orf42	A0A1B0GVH6	325 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	C5orf51	A6NDU8	294 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	SH2D7	A6NKC9	451 aa	Predicted RBP	11.33	□□□□□ -0.6
ABR-223	ENST00000573895	MARCH11	A6NNE9	402 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	NCBP2L	A6PVI3	153 aa	Known RBP	11.33	□□□□□ -0.6
ABR-223	ENST00000573895	GOSR2	O14653	212 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	ADAP1	O75689	374 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	OR2A4	O95047	310 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	SPDEF	O95238	335 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	IL6R	P08887	468 aa	Predicted RBP	11.33	□□□□□ -0.6
ABR-223	ENST00000573895	FGF2	P09038	288 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	G6PC	P35575	357 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	UBE2K	P61086	200 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	VMA21	Q3ZAQ7	101 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	TCTEX1D4	Q5JR98	221 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	FOXRED2	Q8IWF2	684 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	FAM71E2	Q8N5Q1	922 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895		Q8N9W7	124 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	OR11H7	Q8NGC8	314 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	OR5M8	Q8NGP6	311 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	GPR146	Q96CH1	333 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	OR2A7	Q96R45	310 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	ZNF436	Q9C0F3	470 aa	Predicted RBP	11.33	□□□□□ -0.6
ABR-223	ENST00000573895	COA4	Q9NYJ1	87 aa		11.33	□□□□□ -0.6
ABR-223	ENST00000573895	TCRBV4S1A1T	A0A5B7	111 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	PSMB11	A5LHX3	300 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	SRRM4	A7MD48	611 aa	Known RBP	11.32	□□□□□ -0.6
ABR-223	ENST00000573895	KCNAB3	O43448	404 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	SNAPC5	O75971	98 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895		P0C879	139 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	CXCL3	P19876	107 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	DEFA6	Q01524	100 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	SMCO1	Q147U7	214 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	IAH1	Q2TAA2	248 aa	Predicted RBP	11.32	□□□□□ -0.6
ABR-223	ENST00000573895	THOC7	Q6I9Y2	204 aa	Known RBP	11.32	□□□□□ -0.6
ABR-223	ENST00000573895	SLC35E3	Q7Z769	313 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	COMMD1	Q8N668	190 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	NPB	Q8NG41	125 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	GON7	Q9BXV9	100 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.32	□□□□□ -0.6
ABR-223	ENST00000573895	FKBP11	Q9NYL4	201 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	BET1L	Q9NYM9	111 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	ZNF580	Q9UK33	172 aa		11.32	□□□□□ -0.6
ABR-223	ENST00000573895	FAM25E	A8MYX2	175 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	AP4M1	O00189	453 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	IGLV2-23	P01705	113 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	GIP	P09681	153 aa	Predicted RBP	11.31	□□□□□ -0.6
ABR-223	ENST00000573895	RAP2B	P61225	183 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	SLC35B1	P78383	322 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	PSG5	Q15238	335 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	HIST2H2BD	Q6DRA6	164 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	OR4A47	Q6IF82	309 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	PUSL1	Q8N0Z8	303 aa	Known RBP	11.31	□□□□□ -0.6
ABR-223	ENST00000573895	TMEM167A	Q8TBQ9	72 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	RITA1	Q96K30	269 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	RASL11B	Q9BPW5	248 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	PDCD10	Q9BUL8	212 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	NMES1	Q9C002	83 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	ZFP57	Q9NU63	452 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	TMEM140	Q9NV12	185 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	KIAA1456	Q9P272	454 aa		11.31	□□□□□ -0.6
ABR-223	ENST00000573895	UPK2	O00526	184 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	CCS	O14618	274 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	RRH	O14718	337 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	CCNK	O75909	580 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	SIX6	O95475	246 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	CRYGB	P07316	175 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	F2RL1	P55085	397 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	H2BFS	P57053	126 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	SSX9	Q7RTT3	188 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	AKAP14	Q86UN6	197 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	STPG2	Q8N412	459 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.3	□□□□□ -0.6
ABR-223	ENST00000573895	WFDC9	Q8NEX5	89 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	OR4A16	Q8NH70	328 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	OR10C1	Q96KK4	312 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	GSKIP	Q9P0R6	139 aa		11.3	□□□□□ -0.6
ABR-223	ENST00000573895	FAM90A26	D6RGX4	464 aa		11.29	□□□□□ -0.6
ABR-223	ENST00000573895	NBR2	O15453	112 aa		11.29	□□□□□ -0.6
ABR-223	ENST00000573895	WIPF1	O43516	503 aa		11.29	□□□□□ -0.6
ABR-223	ENST00000573895	PFDN1	O60925	122 aa		11.29	□□□□□ -0.6

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