RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 CCL28Q9NRJ3 127 aa16.4■□□□□ 0.22
SNF8-216ENST00000573795 BLOC1S6Q9UL45 172 aa16.4■□□□□ 0.22
SNF8-216ENST00000573795 LOC102724200A0A096LPH7 203 aaPredicted RBP16.39■□□□□ 0.21
SNF8-216ENST00000573795 IGLC7A0M8Q6 106 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 DHFRP00374 187 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 HRASP01112 189 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 CLEC3BP05452 202 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 FGF9P31371 208 aaPredicted RBP16.39■□□□□ 0.21
SNF8-216ENST00000573795 ZNF773Q6PK81 442 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 DAPK2Q9UIK4 370 aa16.39■□□□□ 0.21
SNF8-216ENST00000573795 TRBV7-1A0A0A6YYK4 115 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 TRAV3A0A0B4J244 114 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 EWSR1Q01844 656 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNF8-216ENST00000573795 MSMO1Q15800 293 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 UBE2UQ5VVX9 321 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 GVQW1Q8N7I0 195 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 OR4A5Q8NH83 315 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 ZNF502Q8TBZ5 544 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 SECTM1Q8WVN6 248 aa16.38■□□□□ 0.21
SNF8-216ENST00000573795 SCGNO76038 276 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 FCGR2CP31995 323 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 GPR183P32249 361 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 SFXN4Q6P4A7 337 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 SPAG16Q8N0X2 631 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 OR13F1Q8NGS4 319 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 CXorf58Q96LI9 332 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 RHBDL2Q9NX52 303 aa16.37■□□□□ 0.21
SNF8-216ENST00000573795 TRAV25A0A0B4J276 109 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 IGHV3-35A0A0C4DH35 117 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 RBFOX2O43251 390 aaKnown RBP eCLIP16.36■□□□□ 0.21
SNF8-216ENST00000573795 DEFA4P12838 97 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 GABARAPL2P60520 117 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 POU2AF1Q16633 256 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 ZNF585BQ52M93 769 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 BEST4Q8NFU0 473 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 MARC2Q969Z3 335 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 SLC25A38Q96DW6 304 aa16.36■□□□□ 0.21
SNF8-216ENST00000573795 RRP15Q9Y3B9 282 aaKnown RBP16.36■□□□□ 0.21
SNF8-216ENST00000573795 SULT1C2O00338 296 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 UPK2O00526 184 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 PPYP01298 95 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 HSPA13P48723 471 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 ANKRD55Q3KP44 614 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 TPRA1Q86W33 373 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 HOGA1Q86XE5 327 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 OR5H6Q8NGV6 325 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 ZNF436Q9C0F3 470 aaPredicted RBP16.35■□□□□ 0.21
SNF8-216ENST00000573795 HRASLSQ9HDD0 168 aa16.35■□□□□ 0.21
SNF8-216ENST00000573795 MRPL27Q9P0M9 148 aaKnown RBP16.35■□□□□ 0.21
SNF8-216ENST00000573795 VPS13DQ5THJ4 4388 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 CLEC2LP0C7M8 214 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 ELLP55199 621 aaPredicted RBP16.34■□□□□ 0.21
SNF8-216ENST00000573795 TAS2R31P59538 309 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 ARPC4P59998 168 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 WFDC3Q8IUB2 231 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 SPARTQ8N0X7 666 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 OR1L6Q8NGR2 347 aa16.34■□□□□ 0.21
SNF8-216ENST00000573795 A0A0J9YWU9 116 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 MRPS14O60783 128 aaKnown RBP16.33■□□□□ 0.2
SNF8-216ENST00000573795 PTBP1P26599 531 aaKnown RBP eCLIP16.33■□□□□ 0.2
SNF8-216ENST00000573795 PSMB9P28065 219 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 PMS2P11Q13670 270 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 ZBTB34Q8NCN2 500 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 OR10W1Q8NGF6 305 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 TMEM190Q8WZ59 177 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 VCX3BQ9H321 246 aa16.33■□□□□ 0.2
SNF8-216ENST00000573795 HERC2O95714 4834 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 TRAV18A0A075B6X5 111 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 TGOLN2O43493 480 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 HPRT1P00492 218 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 NQO2P16083 231 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 SDC2P34741 201 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 PLET1Q6UQ28 207 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 ZNF818PQ6ZRF7 136 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 RBPMS2Q6ZRY4 209 aaKnown RBP16.32■□□□□ 0.2
SNF8-216ENST00000573795 OR2C3Q8N628 320 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 SRSF8Q9BRL6 282 aaKnown RBP16.32■□□□□ 0.2
SNF8-216ENST00000573795 AIFM2Q9BRQ8 373 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 SLC5A7Q9GZV3 580 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 C5orf66Q9H5L9 145 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 RNF167Q9H6Y7 350 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 TMEM140Q9NV12 185 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 UBQLN2Q9UHD9 624 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 UFC1Q9Y3C8 167 aa16.32■□□□□ 0.2
SNF8-216ENST00000573795 S1PR2O95136 353 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 FCER2P06734 321 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 WT1-ASQ06250 92 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 TNFRSF9Q07011 255 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 ODF3L2Q3SX64 289 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 LYG2Q86SG7 212 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 SPAG8Q99932 426 aaPredicted RBP16.31■□□□□ 0.2
SNF8-216ENST00000573795 QTRT1Q9BXR0 403 aaKnown RBP16.31■□□□□ 0.2
SNF8-216ENST00000573795 RAB26Q9ULW5 256 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 TP53TG1Q9Y2A0 90 aa16.31■□□□□ 0.2
SNF8-216ENST00000573795 CXorf65A6NEN9 183 aa16.3■□□□□ 0.2
SNF8-216ENST00000573795 TSPAN4O14817 238 aa16.3■□□□□ 0.2
SNF8-216ENST00000573795 LY6G6CO95867 125 aa16.3■□□□□ 0.2
SNF8-216ENST00000573795 FGF2P09038 288 aa16.3■□□□□ 0.2
SNF8-216ENST00000573795 MFAP2P55001 183 aa16.3■□□□□ 0.2
SNF8-216ENST00000573795 FXYD4P59646 89 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms