RNA–Protein interactions for RNA: ENST00000569575.5

RAB40C-212, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-212ENST00000569575 TNXAQ16473 311 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 AKIRIN2Q53H80 203 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 ARSJQ5FYB0 599 aaPredicted RBP18.55■□□□□ 0.56
RAB40C-212ENST00000569575 C9orf152Q5JTZ5 239 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 OR1L8Q8NGR8 309 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 SGMS2Q8NHU3 365 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 ARPC1AQ92747 370 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 PDCD10Q9BUL8 212 aa18.55■□□□□ 0.56
RAB40C-212ENST00000569575 RBMXL2O75526 392 aaKnown RBP18.54■□□□□ 0.56
RAB40C-212ENST00000569575 OR9G9P0C7N8 305 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 HSPE1P61604 102 aaKnown RBP18.54■□□□□ 0.56
RAB40C-212ENST00000569575 PRIMA1Q86XR5 153 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 GPR146Q96CH1 333 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 RBMXL1Q96E39 390 aaKnown RBP18.54■□□□□ 0.56
RAB40C-212ENST00000569575 CLCC1Q96S66 551 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 TPSG1Q9NRR2 321 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 C2CD3Q4AC94 2353 aa18.54■□□□□ 0.56
RAB40C-212ENST00000569575 A0A0B4J293 547 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 FAM90A26D6RGX4 464 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 LY86O95711 162 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 VDAC2P45880 294 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-212ENST00000569575 RPL27AP46776 148 aaKnown RBP18.53■□□□□ 0.56
RAB40C-212ENST00000569575 PJVKQ0ZLH3 352 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 PDLIM3Q53GG5 364 aaPredicted RBP18.53■□□□□ 0.56
RAB40C-212ENST00000569575 GGNBP1Q5YKI7 109 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 SRSF12Q8WXF0 261 aaKnown RBP18.53■□□□□ 0.56
RAB40C-212ENST00000569575 TMEM158Q8WZ71 300 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 PRR13Q9NZ81 148 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 OR51B2Q9Y5P1 312 aa18.53■□□□□ 0.56
RAB40C-212ENST00000569575 SETD2Q9BYW2 2564 aaPredicted RBP18.52■□□□□ 0.56
RAB40C-212ENST00000569575 HOXB5P09067 269 aa18.52■□□□□ 0.56
RAB40C-212ENST00000569575 HSPB9Q9BQS6 159 aa18.52■□□□□ 0.56
RAB40C-212ENST00000569575 QTRT1Q9BXR0 403 aaKnown RBP18.52■□□□□ 0.56
RAB40C-212ENST00000569575 CACNG5Q9UF02 275 aa18.52■□□□□ 0.56
RAB40C-212ENST00000569575 TRAV3A0A0B4J244 114 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 A0A1W2PN81 502 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 TMEM89A2RUT3 159 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 CLPSL1A2RUU4 121 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 INS-IGF2F8WCM5 200 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 TRAPPC2P0DI81 140 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 TRAPPC2BP0DI82 140 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 CHRNA7P36544 502 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 SPCS3P61009 180 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 GNB1P62873 340 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 COMMD1Q8N668 190 aa18.51■□□□□ 0.55
RAB40C-212ENST00000569575 A0A0G2JRQ6 117 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 TEX50A0A1B0GTY4 177 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 SSNA1O43805 119 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 PITX3O75364 302 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 OR2B8PP59922 312 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 SLC35B1P78383 322 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 SSBP2P81877 361 aaPredicted RBP18.5■□□□□ 0.55
RAB40C-212ENST00000569575 CYCSP99999 105 aaKnown RBP18.5■□□□□ 0.55
RAB40C-212ENST00000569575 Q6ZRM9 215 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 UXS1Q8NBZ7 420 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 LINC01006Q8NI28 216 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 PARP11Q9NR21 331 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 NDUFA4L2Q9NRX3 87 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 SERTAD4Q9NUC0 356 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 ALG5Q9Y673 324 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 PLXNB1O43157 2135 aa18.5■□□□□ 0.55
RAB40C-212ENST00000569575 MSGN1A6NI15 193 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 ATP6V0E1O15342 81 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 BRI3O95415 125 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 PRCDQ00LT1 54 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 GSG1LQ6UXU4 331 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 Q6ZS46 218 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 STPG2Q8N412 459 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 OR1S1Q8NH92 325 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 WNT10AQ9GZT5 417 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 ZFP57Q9NU63 452 aa18.49■□□□□ 0.55
RAB40C-212ENST00000569575 TRAV41A0A0B4J266 112 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 MED6O75586 246 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 ADAP1O75689 374 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 IFNA17P01571 189 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 OR5M8Q8NGP6 311 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 ABHD5Q8WTS1 349 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 ASB13Q8WXK3 278 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 HSPB7Q9UBY9 170 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 NSG2Q9Y328 171 aa18.48■□□□□ 0.55
RAB40C-212ENST00000569575 SH2D7A6NKC9 451 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-212ENST00000569575 H3BUA1 57 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 ST8SIA3O43173 380 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 EGR2P11161 476 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-212ENST00000569575 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.47■□□□□ 0.55
RAB40C-212ENST00000569575 OR1L6Q8NGR2 347 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 GRPEL2Q8TAA5 225 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 C2orf50Q96LR7 162 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 MED28Q9H204 178 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 RNF114Q9Y508 228 aa18.47■□□□□ 0.55
RAB40C-212ENST00000569575 CYB5BO43169 146 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 ATP5IP56385 69 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-212ENST00000569575 NDPQ00604 133 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 IZUMO4Q1ZYL8 232 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 IAH1Q2TAA2 248 aaPredicted RBP18.46■□□□□ 0.55
RAB40C-212ENST00000569575 C19orf54Q5BKX5 351 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 TTC9CQ8N5M4 171 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 PLEKHA3Q9HB20 300 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 ENY2Q9NPA8 101 aa18.46■□□□□ 0.55
RAB40C-212ENST00000569575 C5orf51A6NDU8 294 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms