RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 CD300LFQ8TDQ1 290 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 RITA1Q96K30 269 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 HYLS1Q96M11 299 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 ZNF702PQ9H963 129 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 PLEKHA2Q9HB19 425 aa8.67□□□□□ -1.02
SHMT2-218ENST00000555213 HMSDA8MTL9 139 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 RRHO14718 337 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 KCNAB3O43448 404 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 HPRT1P00492 218 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 IFNA21P01568 189 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 SLC25A6P12236 298 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 CXCL2P19875 107 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 MDKP21741 143 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-218ENST00000555213 G6PCP35575 357 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 COMPP49747 757 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-218ENST00000555213 BLCAPP62952 87 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 CYCSP99999 105 aaKnown RBP8.66□□□□□ -1.02
SHMT2-218ENST00000555213 RAB32Q13637 225 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 VMA21Q3ZAQ7 101 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 TMEM177Q53S58 311 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 CXorf66Q5JRM2 361 aaPredicted RBP8.66□□□□□ -1.02
SHMT2-218ENST00000555213 FOXRED2Q8IWF2 684 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 Q8N2B8 174 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 C9orf62Q8N4C0 152 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 FAM71E2Q8N5Q1 922 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 Q8N9W7 124 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 DMBX1Q8NFW5 382 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 LINC01006Q8NI28 216 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 GRPEL2Q8TAA5 225 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 AIFM2Q9BRQ8 373 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 PLSCR3Q9NRY6 295 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 OR5AC2Q9NZP5 309 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 GSKIPQ9P0R6 139 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 RNF114Q9Y508 228 aa8.66□□□□□ -1.02
SHMT2-218ENST00000555213 TRAV3A0A0B4J244 114 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 A0A1B0GU03 582 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 NDUFA3O95167 84 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 KRASP01116 189 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 AMY1AP04745 511 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 F2RL1P55085 397 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 PAX9P55771 341 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 POU2AF1Q16633 256 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 C5orf64Q2M2E5 130 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 MRGPRG-AS1Q2M3A8 158 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 C11orf87Q6NUJ2 197 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 SLC35E3Q7Z769 313 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 C3orf56Q8N813 242 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 OR1S1Q8NH92 325 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 SPATA3Q8NHX4 192 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 VSTM2AQ8TAG5 236 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 TAF15Q92804 592 aaKnown RBP eCLIP8.65□□□□□ -1.02
SHMT2-218ENST00000555213 RRNAD1Q96FB5 475 aaKnown RBP8.65□□□□□ -1.02
SHMT2-218ENST00000555213 PDCD10Q9BUL8 212 aa8.65□□□□□ -1.02
SHMT2-218ENST00000555213 METTL1Q9UBP6 276 aaKnown RBP8.65□□□□□ -1.02
SHMT2-218ENST00000555213 COL6A5A8TX70 2615 aa8.65□□□□□ -1.03
SHMT2-218ENST00000555213 SH2D7A6NKC9 451 aaPredicted RBP8.64□□□□□ -1.03
SHMT2-218ENST00000555213 K7EPK0 472 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 SLC25A17O43808 307 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 TMEM50AO95807 157 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 HRASP01112 189 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 IGLV2-23P01705 113 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 HLA-DRB1P01911 266 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 OR9G9P0C7N8 305 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 CNTFRP26992 372 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 UBE2KP61086 200 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 ERVK-16P61578 105 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 PSG5Q15238 335 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 LRRC37A5PQ49AS3 106 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 AARDQ4LEZ3 155 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 PRSS54Q6PEW0 395 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 VKORC1L1Q8N0U8 176 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 R3HDM4Q96D70 268 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 GON7Q9BXV9 100 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 FBXL15Q9H469 300 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 COMMD9Q9P000 198 aa8.64□□□□□ -1.03
SHMT2-218ENST00000555213 RNF222A6NCQ9 220 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 AP4M1O00189 453 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 ACTL6BO94805 426 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 IGHG2P01859 326 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 IFITM2Q01629 132 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 SMCO1Q147U7 214 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 PUSL1Q8N0Z8 303 aaKnown RBP8.63□□□□□ -1.03
SHMT2-218ENST00000555213 KLHDC1Q8N7A1 406 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 ABHD5Q8WTS1 349 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 WFDC12Q8WWY7 111 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 COA4Q9NYJ1 87 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 MBD2Q9UBB5 411 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 CACNG5Q9UF02 275 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 TNFSF18Q9UNG2 199 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 RCL1Q9Y2P8 373 aaKnown RBP8.63□□□□□ -1.03
SHMT2-218ENST00000555213 SIGLEC9Q9Y336 463 aa8.63□□□□□ -1.03
SHMT2-218ENST00000555213 MSGN1A6NI15 193 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 MARCH11A6NNE9 402 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 DEDDO75618 318 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 ATG12O94817 140 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 CRYGBP07316 175 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 SAA1P0DJI8 122 aaPredicted RBP8.62□□□□□ -1.03
SHMT2-218ENST00000555213 NQO2P16083 231 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 PROK1P58294 105 aa8.62□□□□□ -1.03
SHMT2-218ENST00000555213 POLR2GP62487 172 aaKnown RBP eCLIP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms