RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 PLSCR3Q9NRY6 295 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 NSG2Q9Y328 171 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 ITPR3Q14573 2671 aa8.31□□□□□ -1.08
NEK3-203ENST00000551355 A0A1W2PN81 502 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 HMSDA8MTL9 139 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 CEBPZOSA8MTT3 80 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 INS-IGF2F8WCM5 200 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 K7EPK0 472 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 L7N2F9 121 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 HLA-DRB1P01911 266 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 HNRNPCP07910 306 aaKnown RBP eCLIP8.3□□□□□ -1.08
NEK3-203ENST00000551355 LYL1P12980 280 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 CD24P25063 80 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 PAX6P26367 422 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 CHRNA7P36544 502 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 NUP62P37198 522 aaPredicted RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 COMPP49747 757 aaPredicted RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 OR2B8PP59922 312 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 VAMP2P63027 116 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 IZUMO4Q1ZYL8 232 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 LRRC37A5PQ49AS3 106 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 ZNF562Q6V9R5 426 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 BCL6BQ8N143 479 aaPredicted RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 FAM71E2Q8N5Q1 922 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 SLC25A33Q9BSK2 321 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 QTRT1Q9BXR0 403 aaKnown RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 HIPK2Q9H2X6 1198 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 FBXL15Q9H469 300 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 LSM5Q9Y4Y9 91 aaKnown RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 WSB1Q9Y6I7 421 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 FLNBO75369 2602 aaKnown RBP8.3□□□□□ -1.08
NEK3-203ENST00000551355 BAHCC1Q9P281 2608 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 VPS13CQ709C8 3753 aa8.3□□□□□ -1.08
NEK3-203ENST00000551355 WNK2Q9Y3S1 2297 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 CSMD1Q96PZ7 3565 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 MAP1AP78559 2803 aaPredicted RBP8.29□□□□□ -1.08
NEK3-203ENST00000551355 TRAV3A0A0B4J244 114 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 TEX50A0A1B0GTY4 177 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 CHST1O43916 411 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 CNIH1O95406 144 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 SRD5A1P18405 259 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 C4BPBP20851 252 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 CNTFRP26992 372 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 P2RY1P47900 373 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 POLR2GP62487 172 aaKnown RBP eCLIP8.29□□□□□ -1.08
NEK3-203ENST00000551355 RPL23AP62750 156 aaKnown RBP8.29□□□□□ -1.08
NEK3-203ENST00000551355 ZNF546Q86UE3 836 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 NOXA1Q86UR1 476 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 Q8N9W7 124 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 INO80EQ8NBZ0 244 aaPredicted RBP8.29□□□□□ -1.08
NEK3-203ENST00000551355 DTD1Q8TEA8 209 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 WDR89Q96FK6 387 aaPredicted RBP8.29□□□□□ -1.08
NEK3-203ENST00000551355 SMIM8Q96KF7 97 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 RBKSQ9H477 322 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 PLEKHA3Q9HB20 300 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 NDUFA4L2Q9NRX3 87 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 VPREB3Q9UKI3 123 aa8.29□□□□□ -1.08
NEK3-203ENST00000551355 FXYD6-FXYD2A0A087WZ82 144 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 TRAV14DV4A0A0A6YYC5 116 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 SSSCA1O60232 199 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 TSC22D2O75157 780 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 TSPAN9O75954 239 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 RPL27AP46776 148 aaKnown RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 HOXA1P49639 335 aaPredicted RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 TNXAQ16473 311 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 C5orf56Q8N8D9 126 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 ZNF418Q8TF45 676 aaPredicted RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 C22orf15Q8WYQ4 148 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 DCUN1D4Q92564 292 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 TMEM68Q96MH6 324 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 JMJD8Q96S16 334 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 RNF126Q9BV68 326 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 SLC25A31Q9H0C2 315 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 MAGT1Q9H0U3 335 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 MBD2Q9UBB5 411 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 RCL1Q9Y2P8 373 aaKnown RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 SOX21Q9Y651 276 aaPredicted RBP8.28□□□□□ -1.08
NEK3-203ENST00000551355 U3KQ87 197 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 ABCA1O95477 2261 aa8.28□□□□□ -1.08
NEK3-203ENST00000551355 MDFIC2A0A1B0GVS7 189 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 G3V3Q6 166 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 CLDN34H7C241 214 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 KCNAB3O43448 404 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 CA2P00918 260 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 HTR2BP41595 481 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 SUB1P53999 127 aaKnown RBP eCLIP8.27□□□□□ -1.09
NEK3-203ENST00000551355 RPL15P61313 204 aaKnown RBP8.27□□□□□ -1.09
NEK3-203ENST00000551355 GNB1P62873 340 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 CD300CQ08708 224 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 PJVKQ0ZLH3 352 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 OR2F1Q13607 317 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 ZNF345Q14585 488 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 FXYD3Q14802 87 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 MRGPRG-AS1Q2M3A8 158 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 Q5BKY6 102 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 IL17RELQ6ZVW7 336 aa8.27□□□□□ -1.09
NEK3-203ENST00000551355 OR2C3Q8N628 320 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms