RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 ESM1Q9NQ30 184 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 TNFRSF19Q9NS68 423 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 TMEM14BQ9NUH8 114 aa7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 SOX21Q9Y651 276 aaPredicted RBP7.77□□□□□ -1.17
SMARCD1-206ENST00000549274 TNCP24821 2201 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 FAM181BA6NEQ2 426 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 DBX1A6NMT0 343 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 SRRM4A7MD48 611 aaKnown RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 FBXO24O75426 580 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 CA2P00918 260 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 IGKV1-39P01597 117 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 IGKV1D-39P04432 117 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 IL6RP08887 468 aaPredicted RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 VDAC2P45880 294 aaPredicted RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 RPL27AP46776 148 aaKnown RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 CRIP2P52943 208 aaPredicted RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 SLC35B1P78383 322 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 TNXAQ16473 311 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 AARDQ4LEZ3 155 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 NOXA1Q86UR1 476 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 Q8N2B8 174 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 COMMD1Q8N668 190 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 UXS1Q8NBZ7 420 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 OR1L6Q8NGR2 347 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 CIB3Q96Q77 187 aaPredicted RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 SEC22CQ9BRL7 303 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 QTRT1Q9BXR0 403 aaKnown RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 MED28Q9H204 178 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 C16orf95Q9H693 158 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 ZNF430Q9H8G1 570 aaPredicted RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 ENY2Q9NPA8 101 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 PGPEP1Q9NXJ5 209 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 OR51B2Q9Y5P1 312 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 TEP1Q99973 2627 aaKnown RBP7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 ZFHX3Q15911 3703 aa7.76□□□□□ -1.17
SMARCD1-206ENST00000549274 C5orf51A6NDU8 294 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 CHST1O43916 411 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 SCAF4O95104 1147 aaKnown RBP7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 IFNA17P01571 189 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 IGKV1-5P01602 117 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 IGF1P05019 195 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 HOXB5P09067 269 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 P0C879 139 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 TRAPPC2P0DI81 140 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 TRAPPC2BP0DI82 140 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 PET100P0DJ07 73 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 SPNP16150 400 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 CNTFRP26992 372 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 ATP5IP56385 69 aaPredicted RBP7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 SPCS3P61009 180 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 HSPE1P61604 102 aaKnown RBP7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 CX3CL1P78423 397 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 RELBQ01201 579 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 FOXL1Q12952 345 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 FXYD3Q14802 87 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 PDLIM3Q53GG5 364 aaPredicted RBP7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 AKIRIN2Q53H80 203 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 C9orf152Q5JTZ5 239 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 GGNBP1Q5YKI7 109 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 LYZL2Q7Z4W2 148 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 VKORC1L1Q8N0U8 176 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 OR52B4Q8NGK2 314 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 OR1S1Q8NH92 325 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 SGMS2Q8NHU3 365 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 LHFPL5Q8TAF8 219 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 ABHD5Q8WTS1 349 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 ALG5Q9Y673 324 aa7.75□□□□□ -1.17
SMARCD1-206ENST00000549274 IGHV7-81A0A0B4J1V7 117 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 TMEM89A2RUT3 159 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 INS-IGF2F8WCM5 200 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 H3BUA1 57 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 WRBO00258 174 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 HKR1P10072 659 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 SUB1P53999 127 aaKnown RBP eCLIP7.74□□□□□ -1.174e-6■■■■■ 28.5
SMARCD1-206ENST00000549274 GNB1P62873 340 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 RPP30P78346 268 aaKnown RBP7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 ERHP84090 104 aaKnown RBP7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 PRCDQ00LT1 54 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 IAH1Q2TAA2 248 aaPredicted RBP7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 OR5M8Q8NGP6 311 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 SRSF12Q8WXF0 261 aaKnown RBP7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 GPR146Q96CH1 333 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 RITA1Q96K30 269 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 C2orf50Q96LR7 162 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 DUX5Q96PT3 197 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 NMES1Q9C002 83 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 PLEKHA3Q9HB20 300 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 PARP11Q9NR21 331 aa7.74□□□□□ -1.17
SMARCD1-206ENST00000549274 FAM25EA8MYX2 175 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 RLN2P04090 185 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 AMY1AP04745 511 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 OR9G9P0C7N8 305 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 PVALBP20472 110 aaPredicted RBP7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 NKX2-1P43699 371 aaPredicted RBP7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 HOXA1P49639 335 aaPredicted RBP7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 RIPPLY3P57055 190 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 RRAS2P62070 204 aaPredicted RBP7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 TNFRSF9Q07011 255 aa7.73□□□□□ -1.17
SMARCD1-206ENST00000549274 FAM209BQ5JX69 171 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms