RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 ZNF580Q9UK33 172 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 PRNDQ9UKY0 176 aa9.36□□□□□ -0.91
LTBR-214ENST00000545445 SNRPGP15A8MWD9 76 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 CA2P00918 260 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 RPL8P62917 257 aaKnown RBP9.35□□□□□ -0.91
LTBR-214ENST00000545445 CX3CL1P78423 397 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 OXA1LQ15070 435 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 ANKRD55Q3KP44 614 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 ARSJQ5FYB0 599 aaPredicted RBP9.35□□□□□ -0.91
LTBR-214ENST00000545445 C9orf152Q5JTZ5 239 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 Q6ZSV7 163 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 FOXRED2Q8IWF2 684 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 LHFPL5Q8TAF8 219 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 DNAH3Q8TD57 4116 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 GON7Q9BXV9 100 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 OR51J1Q9H342 316 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 ZNF430Q9H8G1 570 aaPredicted RBP9.35□□□□□ -0.91
LTBR-214ENST00000545445 TMED3Q9Y3Q3 217 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 RNF114Q9Y508 228 aa9.35□□□□□ -0.91
LTBR-214ENST00000545445 IGHV7-81A0A0B4J1V7 117 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 AP4M1O00189 453 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 FCN1O00602 326 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 CNIH1O95406 144 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 IGKV1-5P01602 117 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 IGF1P05019 195 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 P0C879 139 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 HLA-GP17693 338 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 VDAC2P45880 294 aaPredicted RBP9.34□□□□□ -0.91
LTBR-214ENST00000545445 TMEM267Q0VDI3 215 aaPredicted RBP9.34□□□□□ -0.91
LTBR-214ENST00000545445 FXYD3Q14802 87 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 THOC7Q6I9Y2 204 aaKnown RBP9.34□□□□□ -0.91
LTBR-214ENST00000545445 SLC35G3Q8N808 338 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 OR4A16Q8NH70 328 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 TMEM68Q96MH6 324 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 CLCC1Q96S66 551 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 SPIN2AQ99865 258 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 SPIN2BQ9BPZ2 258 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 COMMD5Q9GZQ3 224 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 TPSG1Q9NRR2 321 aa9.34□□□□□ -0.91
LTBR-214ENST00000545445 A0A1B0GU03 582 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 C15orf61A6NNL5 157 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 RBMXL2O75526 392 aaKnown RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 IFNA21P01568 189 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 SLC25A6P12236 298 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 SPNP16150 400 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 CRIP2P52943 208 aaPredicted RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 PJVKQ0ZLH3 352 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 TNXAQ16473 311 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 MRGPRG-AS1Q2M3A8 158 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 NMSQ5H8A3 153 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 LYZL2Q7Z4W2 148 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 ZNF429Q86V71 674 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 C12orf45Q8N5I9 185 aaPredicted RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 OR52B4Q8NGK2 314 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 OR1L8Q8NGR8 309 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 OR5B3Q8NH48 314 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 LINC01006Q8NI28 216 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 CHPT1Q8WUD6 406 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 ARPC1AQ92747 370 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 HSPB9Q9BQS6 159 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 SRSF8Q9BRL6 282 aaKnown RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 SEC22CQ9BRL7 303 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 TMEM14BQ9NUH8 114 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 COA4Q9NYJ1 87 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 FOXA2Q9Y261 457 aaPredicted RBP9.33□□□□□ -0.92
LTBR-214ENST00000545445 ZNF257Q9Y2Q1 563 aa9.33□□□□□ -0.92
LTBR-214ENST00000545445 SH2D7A6NKC9 451 aaPredicted RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 DBX1A6NMT0 343 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 OR9G9P0C7N8 305 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 SULT1A3P0DMM9 295 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 SULT1A4P0DMN0 295 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 RPL27AP46776 148 aaKnown RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 PROK1P58294 105 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 GNB1P62873 340 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 TATDN3Q17R31 274 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 C2orf68Q2NKX9 166 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 AARDQ4LEZ3 155 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 AKIRIN2Q53H80 203 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 KPRPQ5T749 579 aaPredicted RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 Q6ZS46 218 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 HSD17B13Q7Z5P4 300 aaPredicted RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 MRPL41Q8IXM3 137 aaKnown RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 SRSF12Q8WXF0 261 aaKnown RBP9.32□□□□□ -0.92
LTBR-214ENST00000545445 GPR146Q96CH1 333 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 PARP11Q9NR21 331 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 SERTAD4Q9NUC0 356 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 PRR13Q9NZ81 148 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 OR51B2Q9Y5P1 312 aa9.32□□□□□ -0.92
LTBR-214ENST00000545445 TRAV3A0A0B4J244 114 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 A0A0B4J293 547 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 C7orf66A4D0T2 115 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 ATP6V0E1O15342 81 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 HOXB5P09067 269 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 HSPE1P61604 102 aaKnown RBP9.31□□□□□ -0.92
LTBR-214ENST00000545445 SLC35B1P78383 322 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 SSBP2P81877 361 aaPredicted RBP9.31□□□□□ -0.92
LTBR-214ENST00000545445 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
LTBR-214ENST00000545445 SAMD5Q5TGI4 173 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms