RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 NEIL1Q96FI4 390 aaPredicted RBP20.42■□□□□ 0.86
RAB40C-204ENST00000538492 TCEAL7Q9BRU2 100 aa20.42■□□□□ 0.86
RAB40C-204ENST00000538492 GGACTQ9BVM4 153 aa20.42■□□□□ 0.86
RAB40C-204ENST00000538492 GGTLC1Q9BX51 225 aa20.42■□□□□ 0.86
RAB40C-204ENST00000538492 CTDSP1Q9GZU7 261 aa20.42■□□□□ 0.86
RAB40C-204ENST00000538492 IGKV1-16P04430 117 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 HOXA5P20719 270 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 OPRK1P41145 380 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 HSPE1P61604 102 aaKnown RBP20.41■□□□□ 0.86
RAB40C-204ENST00000538492 Q8NA96 180 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 FOXA2Q9Y261 457 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-204ENST00000538492 THBDP07204 575 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 NPPCP23582 126 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 TMPRSS3P57727 454 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 C4orf17Q53FE4 359 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 CST9LP1Q5W188 147 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 GFRALQ6UXV0 394 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 SLC24A4Q8NFF2 622 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 NIT2Q9NQR4 276 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 RPUSD1Q9UJJ7 312 aaKnown RBP20.41■□□□□ 0.86
RAB40C-204ENST00000538492 C17orf100A8MU93 164 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 NBL1P41271 181 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 ARSJQ5FYB0 599 aaPredicted RBP20.41■□□□□ 0.86
RAB40C-204ENST00000538492 RND1Q92730 232 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 C1orf159Q96HA4 380 aa20.41■□□□□ 0.86
RAB40C-204ENST00000538492 CT45A6P0DMU7 189 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 CT45A5P0DMU8 189 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 CT45A7P0DMV0 189 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 TNFRSF1AP19438 455 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 NPY1RP25929 384 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 ATP5G3P48201 142 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 OR5T1Q8NG75 326 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 FRZBQ92765 325 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 ADTRPQ96IZ2 230 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 ENY2Q9NPA8 101 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 IFITM10A6NMD0 228 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 CA2P00918 260 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 SLC25A48Q6ZT89 311 aaKnown RBP20.4■□□□□ 0.86
RAB40C-204ENST00000538492 ABHD5Q8WTS1 349 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 CORO2AQ92828 525 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 SLC25A10Q9UBX3 287 aaPredicted RBP20.4■□□□□ 0.86
RAB40C-204ENST00000538492 OR51B2Q9Y5P1 312 aa20.4■□□□□ 0.86
RAB40C-204ENST00000538492 CEP295Q9C0D2 2601 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 hADV38S2A0JD32 116 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 HRASP01112 189 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 LINC00574Q9H8X3 128 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 NPVFQ9HCQ7 196 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 TRBV24-1A0A075B6N3 115 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 TRGC1P0CF51 173 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 ARL14EPLP0DKL9 152 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 COL8A2P25067 703 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 OR13D1Q8NGV5 346 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 RAB1CQ92928 201 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 ELOVL5Q9NYP7 299 aa20.39■□□□□ 0.85
RAB40C-204ENST00000538492 SRRM4A7MD48 611 aaKnown RBP20.38■□□□□ 0.85
RAB40C-204ENST00000538492 CLEC12BQ2HXU8 276 aa20.38■□□□□ 0.85
RAB40C-204ENST00000538492 NKX6-3A6NJ46 265 aa20.38■□□□□ 0.85
RAB40C-204ENST00000538492 CCL3L1P16619 93 aa20.38■□□□□ 0.85
RAB40C-204ENST00000538492 CDX1P47902 265 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-204ENST00000538492 PRR30Q53SZ7 412 aaPredicted RBP20.38■□□□□ 0.85
RAB40C-204ENST00000538492 SLC35D1Q9NTN3 355 aa20.38■□□□□ 0.85
RAB40C-204ENST00000538492 LSM4Q9Y4Z0 139 aaKnown RBP20.38■□□□□ 0.85
RAB40C-204ENST00000538492 RPL31P62899 125 aaKnown RBP20.37■□□□□ 0.85
RAB40C-204ENST00000538492 GFI1BQ5VTD9 330 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 TMEM204Q9BSN7 226 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 ELOVL1Q9BW60 279 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 SAP30LQ9HAJ7 183 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 AURKAIP1Q9NWT8 199 aaPredicted RBP20.37■□□□□ 0.85
RAB40C-204ENST00000538492 LINC00312Q9Y6C7 94 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 H7BYZ3 331 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 PDZD11Q5EBL8 140 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 CCL17Q92583 94 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 DERL1Q9BUN8 251 aa20.37■□□□□ 0.85
RAB40C-204ENST00000538492 FCN3O75636 299 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 B2MP61769 119 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 J3QR06 171 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 PFN1P07737 140 aaKnown RBP20.36■□□□□ 0.85
RAB40C-204ENST00000538492 IL6RP08887 468 aaPredicted RBP20.36■□□□□ 0.85
RAB40C-204ENST00000538492 GALR1P47211 349 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 GNB1P62873 340 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 RTL8BQ17RB0 113 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 TEPPQ6URK8 271 aa20.36■□□□□ 0.85
RAB40C-204ENST00000538492 FAM122AQ96E09 287 aa20.35■□□□□ 0.85
RAB40C-204ENST00000538492 NDUFB4O95168 129 aa20.35■□□□□ 0.85
RAB40C-204ENST00000538492 POU2AF1Q16633 256 aa20.35■□□□□ 0.85
RAB40C-204ENST00000538492 SOX15O60248 233 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 STAG3L2P0CL84 134 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 STAG3L3P0CL85 134 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 STPG3Q8N7X2 389 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 PLEKHA3Q9HB20 300 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 SEPSECSQ9HD40 501 aaKnown RBP20.34■□□□□ 0.85
RAB40C-204ENST00000538492 PRNDQ9UKY0 176 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 PDE6DO43924 150 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 OR10A7Q8NGE5 316 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 H1FXQ92522 213 aaKnown RBP20.34■□□□□ 0.85
RAB40C-204ENST00000538492 OR5B12Q96R08 314 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 GAL3ST2Q9H3Q3 398 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 ARFGEF3Q5TH69 2177 aa20.34■□□□□ 0.85
RAB40C-204ENST00000538492 UPK2O00526 184 aa20.33■□□□□ 0.85
RAB40C-204ENST00000538492 SOD3P08294 240 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms