RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 TMEM140Q9NV12 185 aa7.59□□□□□ -1.19
DDB1-211ENST00000538280 RPUSD1Q9UJJ7 312 aaKnown RBP7.59□□□□□ -1.19
DDB1-211ENST00000538280 TCF19Q9Y242 345 aa7.59□□□□□ -1.19
DDB1-211ENST00000538280 ZNF469Q96JG9 3925 aaPredicted RBP7.59□□□□□ -1.2
DDB1-211ENST00000538280 TACC2O95359 2948 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 TRAV3A0A0B4J244 114 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 C17orf100A8MU93 164 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 FNDC10F2Z333 226 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 C16orf97H3BN30 126 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 PRRG2O14669 202 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 TNFRSF13BO14836 293 aaPredicted RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 CYB5BO43169 146 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 KBTBD11O94819 623 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 IFNA17P01571 189 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 CXCL1P09341 107 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 BMP5P22003 454 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 CD1BP29016 333 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 OPRK1P41145 380 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 SNRPEP62304 92 aaKnown RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 MRPS11P82912 194 aaKnown RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 MEF2BQ02080 365 aaPredicted RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 MEF2CQ06413 473 aaPredicted RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 ADIPOQQ15848 244 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 SPINK9Q5DT21 86 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 SLC25A48Q6ZT89 311 aaKnown RBP7.58□□□□□ -1.2
DDB1-211ENST00000538280 FAM216BQ8N7L0 139 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 ZNF383Q8NA42 475 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 OR13D1Q8NGV5 346 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 RAB24Q969Q5 203 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 CCL13Q99616 98 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 CTDSP1Q9GZU7 261 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 TMEM14BQ9NUH8 114 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 NAT8Q9UHE5 227 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 LINC00312Q9Y6C7 94 aa7.58□□□□□ -1.2
DDB1-211ENST00000538280 DSCAMO60469 2012 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 PKDREJQ9NTG1 2253 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 SMCO3A2RU48 225 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 AP4M1O00189 453 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 RRHO14718 337 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 TGOLN2O43493 480 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
DDB1-211ENST00000538280 GYPAP02724 150 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 S100A8P05109 93 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 TNFRSF1AP19438 455 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 CDC34P49427 236 aaPredicted RBP7.57□□□□□ -1.2
DDB1-211ENST00000538280 PSMB3P49720 205 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 MEOX2P50222 304 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 CEBPGP53567 150 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 ERVFRD-1P60508 538 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 HSPE1P61604 102 aaKnown RBP7.57□□□□□ -1.2
DDB1-211ENST00000538280 RPS16P62249 146 aaKnown RBP7.57□□□□□ -1.2
DDB1-211ENST00000538280 OR4A47Q6IF82 309 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 ALKBH2Q6NS38 261 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 ADAM5Q6NVV9 412 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 ZNF343Q6P1L6 599 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 TREML4Q6UXN2 200 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 ZNF709Q8N972 641 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 PLPPR2Q96GM1 343 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 C1orf159Q96HA4 380 aa7.57□□□□□ -1.2
DDB1-211ENST00000538280 LSM4Q9Y4Z0 139 aaKnown RBP7.57□□□□□ -1.2
DDB1-211ENST00000538280 SETD2Q9BYW2 2564 aaPredicted RBP7.57□□□□□ -1.2
DDB1-211ENST00000538280 TRBV24-1A0A075B6N3 115 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 hADV38S2A0JD32 116 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 NKX6-3A6NJ46 265 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 CLDN34H7C241 214 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 UPK2O00526 184 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 RBMXL2O75526 392 aaKnown RBP7.56□□□□□ -1.2
DDB1-211ENST00000538280 FCN3O75636 299 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 MMP23AO75900 390 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 YIF1AO95070 293 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 S100A6P06703 90 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 SMIM6P0DI80 62 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 IRF2P14316 349 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 AKR1D1P51857 326 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 KRTAP10-9P60411 292 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 CDSNQ15517 529 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 ZNF833PQ6ZTB9 187 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 SSX9Q7RTT3 188 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 TGIF2LYQ8IUE0 185 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 VKORC1L1Q8N0U8 176 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 ZNF596Q8TC21 504 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 ITLN2Q8WWU7 325 aaPredicted RBP7.56□□□□□ -1.2
DDB1-211ENST00000538280 LEAP2Q969E1 77 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 C12orf57Q99622 126 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 MGST2Q99735 147 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 PYGO2Q9BRQ0 406 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 GGTLC1Q9BX51 225 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 TMPRSS5Q9H3S3 457 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 MS4A5Q9H3V2 200 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 HEYLQ9NQ87 328 aaPredicted RBP7.56□□□□□ -1.2
DDB1-211ENST00000538280 KCNIP2Q9NS61 270 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 DCAF16Q9NXF7 216 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 ZNF257Q9Y2Q1 563 aa7.56□□□□□ -1.2
DDB1-211ENST00000538280 TET2Q6N021 2002 aaPredicted RBP7.56□□□□□ -1.2
DDB1-211ENST00000538280 ITPR3Q14573 2671 aa7.55□□□□□ -1.2
DDB1-211ENST00000538280 CCDC168Q8NDH2 2452 aa7.55□□□□□ -1.2
DDB1-211ENST00000538280 DYSFO75923 2080 aa7.55□□□□□ -1.2
DDB1-211ENST00000538280 TGIF2-C20orf24A0A0A6YYL0 155 aa7.55□□□□□ -1.2
DDB1-211ENST00000538280 TRAV38-1A0A0B4J264 116 aa7.55□□□□□ -1.2
DDB1-211ENST00000538280 TMEM178BH3BS89 294 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms