RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 G3V318 75 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 SOX15O60248 233 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 PITX3O75364 302 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 CRYBA1P05813 215 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 FGF2P09038 288 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 HLA-GP17693 338 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 PPIFP30405 207 aaKnown RBP7.76□□□□□ -1.17
CLN8-202ENST00000517514 ERVK-16P61578 105 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 RPL8P62917 257 aaKnown RBP7.76□□□□□ -1.17
CLN8-202ENST00000517514 SRPXP78539 464 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 FXYD3Q14802 87 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 PLGLAQ15195 96 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 TNXAQ16473 311 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 GGNBP1Q5YKI7 109 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 HIST2H2BDQ6DRA6 164 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 C11orf87Q6NUJ2 197 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 H2BFWTQ7Z2G1 175 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 FOXRED2Q8IWF2 684 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 VSTM2AQ8TAG5 236 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 SRSF12Q8WXF0 261 aaKnown RBP7.76□□□□□ -1.17
CLN8-202ENST00000517514 MDFIQ99750 246 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 AIFM2Q9BRQ8 373 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 ZNF580Q9UK33 172 aa7.76□□□□□ -1.17
CLN8-202ENST00000517514 FOXA2Q9Y261 457 aaPredicted RBP7.76□□□□□ -1.17
CLN8-202ENST00000517514 DNHD1Q96M86 4753 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 DUXBA0A1W2PPF3 345 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 CLPSL1A2RUU4 121 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 HMX3A6NHT5 357 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 SNRPGP15A8MWD9 76 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 ST8SIA3O43173 380 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 PRAF2O60831 178 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 OPN1MWP04001 364 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 HOXB5P09067 269 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 OPN1MW2P0DN77 364 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 OPN1MW3P0DN78 364 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 ANXA3P12429 323 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 VDAC1P21796 283 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 MAS1LP35410 378 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 VDAC2P45880 294 aaPredicted RBP7.75□□□□□ -1.17
CLN8-202ENST00000517514 AKR1C2P52895 323 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 RIPPLY3P57055 190 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 GNB1P62873 340 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 TATDN3Q17R31 274 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 C19orf35Q6ZS72 473 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 STPG2Q8N412 459 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 C12orf45Q8N5I9 185 aaPredicted RBP7.75□□□□□ -1.17
CLN8-202ENST00000517514 OR10W1Q8NGF6 305 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 OR4F5Q8NH21 305 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 SGMS2Q8NHU3 365 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 ARPC1AQ92747 370 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 WDR89Q96FK6 387 aaPredicted RBP7.75□□□□□ -1.17
CLN8-202ENST00000517514 OR10C1Q96KK4 312 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 PARP11Q9NR21 331 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 NDUFA4L2Q9NRX3 87 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 CACNG5Q9UF02 275 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 ALG5Q9Y673 324 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 WSB1Q9Y6I7 421 aa7.75□□□□□ -1.17
CLN8-202ENST00000517514 STAB1Q9NY15 2570 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 IGLC7A0M8Q6 106 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 MSGN1A6NI15 193 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 AP4M1O00189 453 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 CCSO14618 274 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 KCNAB3O43448 404 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 RBMXL2O75526 392 aaKnown RBP7.74□□□□□ -1.17
CLN8-202ENST00000517514 DHFRP00374 187 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 APELAP0DMC3 54 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 AREGP15514 252 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 RPL27AP46776 148 aaKnown RBP7.74□□□□□ -1.17
CLN8-202ENST00000517514 SRSF4Q08170 494 aaKnown RBP7.74□□□□□ -1.17
CLN8-202ENST00000517514 AWAT1Q58HT5 328 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 ZNF429Q86V71 674 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 FAM219AQ8IW50 185 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 MINDY2Q8NBR6 621 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 LFNGQ8NES3 379 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 OR2T6Q8NHC8 308 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 COQ8AQ8NI60 647 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 GRPEL2Q8TAA5 225 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 RRNAD1Q96FB5 475 aaKnown RBP7.74□□□□□ -1.17
CLN8-202ENST00000517514 PRNDQ9UKY0 176 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 TMED3Q9Y3Q3 217 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 RNF114Q9Y508 228 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 OR51B2Q9Y5P1 312 aa7.74□□□□□ -1.17
CLN8-202ENST00000517514 VWFP04275 2813 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 TRAV41A0A0B4J266 112 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 A0A1B0GU03 582 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 SNAPC5O75971 98 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 ATG12O94817 140 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 CNIH1O95406 144 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 IGLV1-40P01703 118 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 SULT1A3P0DMM9 295 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 SULT1A4P0DMN0 295 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 SLC25A6P12236 298 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 HSPE1P61604 102 aaKnown RBP7.73□□□□□ -1.17
CLN8-202ENST00000517514 WT1-ASQ06250 92 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 IL15RAQ13261 267 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 KIAA0141Q14154 515 aaPredicted RBP7.73□□□□□ -1.17
CLN8-202ENST00000517514 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
CLN8-202ENST00000517514 PDLIM3Q53GG5 364 aaPredicted RBP7.73□□□□□ -1.17
CLN8-202ENST00000517514 AKIRIN2Q53H80 203 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms