RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 C19orf73Q9NVV2 129 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 COMMD9Q9P000 198 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 THYN1Q9P016 225 aa10.39□□□□□ -0.75
TCOF1-215ENST00000515516 TRBV7-1A0A0A6YYK4 115 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 REG1AP05451 166 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 MYOD1P15172 320 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 CTRB1P17538 263 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 GNRHRP30968 328 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 POU2AF1Q16633 256 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 CTRB2Q6GPI1 263 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 C19orf35Q6ZS72 473 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 MUC7Q8TAX7 377 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 MOB3AQ96BX8 217 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 FANCD2OSQ96PS1 177 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 SRSF8Q9BRL6 282 aaKnown RBP10.38□□□□□ -0.75
TCOF1-215ENST00000515516 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 SLC2A8Q9NY64 477 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 COMMD3Q9UBI1 195 aa10.38□□□□□ -0.75
TCOF1-215ENST00000515516 TENM3Q9P273 2699 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 A0A1B0GW64 132 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 ZNF320A2RRD8 509 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 LGALS9O00182 355 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 PGLYRP1O75594 196 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 TPPPO94811 219 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 S1PR2O95136 353 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 HLA-AP01891 365 aaKnown RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 RPA2P15927 270 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 NAT1P18440 290 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 OR2B8PP59922 312 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 TSPAN5P62079 268 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 CD300EQ496F6 205 aaPredicted RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 THOC7Q6I9Y2 204 aaKnown RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 LPCAT3Q6P1A2 487 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 GPHB5Q86YW7 130 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 LAX1Q8IWV1 398 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 CMTM3Q96MX0 182 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 SPATA25Q9BR10 227 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 TM2D3Q9BRN9 247 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 QTRT1Q9BXR0 403 aaKnown RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 PALMDQ9NP74 551 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 TECRQ9NZ01 308 aaKnown RBP10.37□□□□□ -0.75
TCOF1-215ENST00000515516 S4R3C0 116 aa10.37□□□□□ -0.75
TCOF1-215ENST00000515516 SORL1Q92673 2214 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 TRAV3A0A0B4J244 114 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 IZUMO1RA6ND01 250 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 C2orf70A6NJV1 201 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 GPR31O00270 319 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 SNAPC5O75971 98 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 RLN1P04808 185 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 IFNA6P05013 189 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 FGF2P09038 288 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 TRAPPC2P0DI81 140 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 TRAPPC2BP0DI82 140 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 FOLR2P14207 255 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 F2RP25116 425 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 HLA-DMAP28067 261 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 MECP2P51608 486 aaKnown RBP10.36□□□□□ -0.75
TCOF1-215ENST00000515516 CD81P60033 236 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 NCS1P62166 190 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 GUCA2BQ16661 112 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 DEFB114Q30KQ6 69 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 HSD17B13Q7Z5P4 300 aaPredicted RBP10.36□□□□□ -0.75
TCOF1-215ENST00000515516 FUNDC2Q9BWH2 189 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 ANAPC10Q9UM13 185 aa10.36□□□□□ -0.75
TCOF1-215ENST00000515516 IGLV11-55A0A075B6I3 123 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 MARCH11A6NNE9 402 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 APOA1P02647 267 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 CLEC3BP05452 202 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 EIF4EP06730 217 aaKnown RBP10.35□□□□□ -0.75
TCOF1-215ENST00000515516 LYL1P12980 280 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 HRH1P35367 487 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 LPAR6P43657 344 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 RORCP51449 518 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 VBP1P61758 197 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 KLK9Q2XQG4 91 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 MZT2AQ6P582 158 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 SNX29P2Q8IUI4 249 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 OR1L8Q8NGR8 309 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 DGCR14Q96DF8 476 aaKnown RBP10.35□□□□□ -0.75
TCOF1-215ENST00000515516 CCDC140Q96MF4 163 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 CITED4Q96RK1 184 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 NEURL2Q9BR09 285 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 THAP7Q9BT49 309 aaPredicted RBP10.35□□□□□ -0.75
TCOF1-215ENST00000515516 HINT2Q9BX68 163 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 SCPEP1Q9HB40 452 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 KLK9Q9UKQ9 250 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 DMRT1Q9Y5R6 373 aa10.35□□□□□ -0.75
TCOF1-215ENST00000515516 IGLC7A0M8Q6 106 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 CGB1A6NKQ9 187 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 FAM25AB3EWG3 89 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 FAM25CB3EWG5 89 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 FAM25GB3EWG6 89 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 KRASP01116 189 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 OR13C7P0DN81 318 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 CBLN1P23435 193 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 RCVRNP35243 200 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 HAGHQ16775 308 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 SLC25A24Q6NUK1 477 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 PLET1Q6UQ28 207 aa10.34□□□□□ -0.75
TCOF1-215ENST00000515516 ADAMTSL5Q6ZMM2 481 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms