RNA–Protein interactions for RNA: ENST00000515311.5

LSM6-207, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4

Gene LSM6, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-207ENST00000515311 GNB1P62873 340 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 FXYD3Q14802 87 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 TNXAQ16473 311 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 AARDQ4LEZ3 155 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 Q6ZRM9 215 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 ZNF429Q86V71 674 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 UXS1Q8NBZ7 420 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 OR2T6Q8NHC8 308 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 ARPC1AQ92747 370 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 COMMD5Q9GZQ3 224 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 CACNG5Q9UF02 275 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 ZNF580Q9UK33 172 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 ZNF257Q9Y2Q1 563 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 NSG2Q9Y328 171 aa16.58■□□□□ 0.24
LSM6-207ENST00000515311 IGF1P05019 195 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 OR2B8PP59922 312 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 NDPQ00604 133 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 SMCO1Q147U7 214 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 OR5B3Q8NH48 314 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 SPIN2AQ99865 258 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 SPIN2BQ9BPZ2 258 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.57■□□□□ 0.24
LSM6-207ENST00000515311 CACFD1Q9UGQ2 172 aa16.57■□□□□ 0.24
LSM6-207ENST00000515311 AP4M1O00189 453 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 SSNA1O43805 119 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 RBMXL2O75526 392 aaKnown RBP16.56■□□□□ 0.24
LSM6-207ENST00000515311 HKR1P10072 659 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 CRIP2P52943 208 aaPredicted RBP16.56■□□□□ 0.24
LSM6-207ENST00000515311 OR4F5Q8NH21 305 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 SRSF12Q8WXF0 261 aaKnown RBP16.56■□□□□ 0.24
LSM6-207ENST00000515311 PARP11Q9NR21 331 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 OR51B2Q9Y5P1 312 aa16.56■□□□□ 0.24
LSM6-207ENST00000515311 TET2Q6N021 2002 aaPredicted RBP16.56■□□□□ 0.24
LSM6-207ENST00000515311 ATP6V0E1O15342 81 aa16.55■□□□□ 0.24
LSM6-207ENST00000515311 RPL27AP46776 148 aaKnown RBP16.55■□□□□ 0.24
LSM6-207ENST00000515311 ARSJQ5FYB0 599 aaPredicted RBP16.55■□□□□ 0.24
LSM6-207ENST00000515311 C10orf55Q5SWW7 151 aa16.55■□□□□ 0.24
LSM6-207ENST00000515311 THOC7Q6I9Y2 204 aaKnown RBP16.55■□□□□ 0.24
LSM6-207ENST00000515311 OR1L8Q8NGR8 309 aa16.55■□□□□ 0.24
LSM6-207ENST00000515311 GRPEL2Q8TAA5 225 aa16.55■□□□□ 0.24
LSM6-207ENST00000515311 ATRQ13535 2644 aa16.55■□□□□ 0.24
LSM6-207ENST00000515311 TEX50A0A1B0GTY4 177 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 LINC01548A6NM66 108 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 PITX3O75364 302 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 EGR2P11161 476 aaPredicted RBP16.54■□□□□ 0.24
LSM6-207ENST00000515311 VDAC2P45880 294 aaPredicted RBP16.54■□□□□ 0.24
LSM6-207ENST00000515311 HSPE1P61604 102 aaKnown RBP16.54■□□□□ 0.24
LSM6-207ENST00000515311 SGMS2Q8NHU3 365 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 ABHD5Q8WTS1 349 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 SRSF8Q9BRL6 282 aaKnown RBP16.54■□□□□ 0.24
LSM6-207ENST00000515311 QTRT1Q9BXR0 403 aaKnown RBP16.54■□□□□ 0.24
LSM6-207ENST00000515311 SERTAD4Q9NUC0 356 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 FBXO7Q9Y3I1 522 aa16.54■□□□□ 0.24
LSM6-207ENST00000515311 MPTX1A8MV57 137 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 ST8SIA3O43173 380 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 MYOD1P15172 320 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 TMEM95Q3KNT9 176 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 PDLIM3Q53GG5 364 aaPredicted RBP16.53■□□□□ 0.24
LSM6-207ENST00000515311 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.53■□□□□ 0.24
LSM6-207ENST00000515311 OR52E5Q8NH55 327 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 LINC01006Q8NI28 216 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 TAF15Q92804 592 aaKnown RBP eCLIP16.53■□□□□ 0.24
LSM6-207ENST00000515311 PDCD10Q9BUL8 212 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 NDUFA4L2Q9NRX3 87 aa16.53■□□□□ 0.24
LSM6-207ENST00000515311 A0A1B0GW64 132 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 MSGN1A6NI15 193 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 CGB1A6NKQ9 187 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 TEX22C9J3V5 150 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 CCSO14618 274 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 TRAPPC2P0DI81 140 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 TRAPPC2BP0DI82 140 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 TMEM267Q0VDI3 215 aaPredicted RBP16.52■□□□□ 0.24
LSM6-207ENST00000515311 C2orf68Q2NKX9 166 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 IAH1Q2TAA2 248 aaPredicted RBP16.52■□□□□ 0.24
LSM6-207ENST00000515311 AKIRIN2Q53H80 203 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 Q6ZNX1 250 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 OR5M8Q8NGP6 311 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 OR1S1Q8NH92 325 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 OR10C1Q96KK4 312 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 TMEM68Q96MH6 324 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 GON7Q9BXV9 100 aa16.52■□□□□ 0.24
LSM6-207ENST00000515311 A0A1B0GUS0 222 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 FAM90A26D6RGX4 464 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 E7EUB6 86 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 GOSR2O14653 212 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 IFNA17P01571 189 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 OPN1MWP04001 364 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 OPN1MW2P0DN77 364 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 OPN1MW3P0DN78 364 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 SPCS3P61009 180 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 PRCDQ00LT1 54 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 KRTAP24-1Q3LI83 254 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 C19orf54Q5BKX5 351 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 GSG1LQ6UXU4 331 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 HSD17B13Q7Z5P4 300 aaPredicted RBP16.51■□□□□ 0.23
LSM6-207ENST00000515311 STPG2Q8N412 459 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 FYTTD1Q96QD9 318 aaKnown RBP16.51■□□□□ 0.23
LSM6-207ENST00000515311 FAM103A1Q9BTL3 118 aaKnown RBP16.51■□□□□ 0.23
LSM6-207ENST00000515311 MED28Q9H204 178 aa16.51■□□□□ 0.23
LSM6-207ENST00000515311 HSPB7Q9UBY9 170 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms