RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 A0A0B4J2A0 478 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 LOC107986453A0A1B0GWG9 222 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 PQLC2LA1A4F0 135 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 FUOMA2VDF0 154 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ERICH4A6NGS2 130 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 H0YHG0 523 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 J3QT63 122 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 TOR1AO14656 332 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 SLC31A2O15432 143 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ZNF861PO60384 105 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 SULT1C4O75897 302 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 CLIC3O95833 236 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 HAND1O96004 215 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ARG1P05089 322 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 FBP1P09467 338 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 UBCP0CG48 685 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 CCL3L1P16619 93 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 MYL12AP19105 171 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 RAB3AP20336 220 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 MDKP21741 143 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 NFYBP25208 207 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 PAX6P26367 422 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 CTRLP40313 264 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 KIR3DL2P43630 455 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 NPBWR2P48146 333 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 UBE2AP49459 152 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 RAB13P51153 203 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 GTF2A1P52655 376 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 SNRPGP62308 76 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 ACTA2P62736 377 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ACTG2P63267 376 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 DAZ2Q13117 558 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 RCN1Q15293 331 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 RSU1Q15404 277 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 LTC4SQ16873 150 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 STUMQ69YW2 141 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 UQCC3Q6UW78 93 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 C19orf35Q6ZS72 473 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 CALHM1Q8IU99 346 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 FAM58AQ8N1B3 248 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 STX19Q8N4C7 294 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ZNF561Q8N587 486 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ZFP41Q8N8Y5 198 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 BPIFB6Q8NFQ5 453 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 OR10K1Q8NGX5 313 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 OR2G3Q8NGZ4 309 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ANGPTL6Q8NI99 470 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 NDNFQ8TB73 568 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 NEK7Q8TDX7 302 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 PP6455Q8WZ26 134 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 C12orf43Q96C57 262 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 ADAT3Q96EY9 351 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 CHRDL1Q9BU40 450 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 TMEM59Q9BXS4 323 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 GABARAPL3Q9BY60 117 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 SLC25A39Q9BZJ4 359 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 CCDC90BQ9GZT6 254 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 FAM192AQ9GZU8 254 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 FGF23Q9GZV9 251 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 CHST6Q9GZX3 395 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 DNTTIP1Q9H147 329 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 VCXQ9H320 206 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 EXOSC4Q9NPD3 245 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 ZNF331Q9NQX6 463 aaPredicted RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 DAZ3Q9NR90 486 aaKnown RBP2.83□□□□□ -1.96
HTT-210ENST00000512909 MTCH1Q9NZJ7 389 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 KAAG1Q9UBP8 84 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 SHPKQ9UHJ6 478 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 HHLA2Q9UM44 414 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 HILPDAQ9Y5L2 63 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 KPTNQ9Y664 436 aa2.83□□□□□ -1.96
HTT-210ENST00000512909 ARID1AO14497 2285 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 HRNRQ86YZ3 2850 aaPredicted RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 NBPF19A0A087WUL8 3843 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TRGV10A0A0A0MS01 117 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 hADV38S2A0JD32 116 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 IRGMA1A4Y4 181 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CLPSL1A2RUU4 121 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 RNASEK-C17orf49H0YIS7 233 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 H3BUX3 64 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 M0R1W7 72 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 GOSR2O14653 212 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CDRT1O95170 752 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 FSTL3O95633 263 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 IGHV3-7P01780 117 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 MAS1P04201 325 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CD2P06729 351 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 PGA5P0DJD9 388 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 ZNF728P0DKX0 622 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 TGFBR2P37173 567 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 RPS10P46783 165 aaKnown RBP2.82□□□□□ -1.96
HTT-210ENST00000512909 NMUP48645 174 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 ETV1P50549 477 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 UBE2E1P51965 193 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 PRRX1P54821 245 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 CAV3P56539 151 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 PPP3R1P63098 170 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 AESQ08117 197 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 ST3GAL4Q11206 333 aa2.82□□□□□ -1.96
HTT-210ENST00000512909 HES1Q14469 280 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms