RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 LDLRAD2Q5SZI1 272 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 LINC01356Q8N9X3 169 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 OR2T10Q8NGZ9 312 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 MED9Q9NWA0 146 aa12.24□□□□□ -0.45
SCLT1-209ENST00000511426 SPTAN1Q13813 2472 aaKnown RBP12.23□□□□□ -0.45
SCLT1-209ENST00000511426 LRBAP50851 2863 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 SPP1P10451 314 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 BRS3P32247 399 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 KRTAP10-9P60411 292 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 PSG5Q15238 335 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 HSD17B13Q7Z5P4 300 aaPredicted RBP12.23□□□□□ -0.45
SCLT1-209ENST00000511426 THNSL2Q86YJ6 484 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 PDZD9Q8IXQ8 264 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 LILRB2Q8N423 598 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 TMEM217Q8N7C4 229 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 NPBQ8NG41 125 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 SRSF8Q9BRL6 282 aaKnown RBP12.23□□□□□ -0.45
SCLT1-209ENST00000511426 NDUFA4L2Q9NRX3 87 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 AUP1Q9Y679 476 aa12.23□□□□□ -0.45
SCLT1-209ENST00000511426 TEX50A0A1B0GTY4 177 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 LINC00862A6NCI5 91 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 PMS2P5A8MQ11 134 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 FNDC10F2Z333 226 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 NPFFO15130 113 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SLC25A17O43808 307 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 ACTL6BO94805 426 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 NDUFA3O95167 84 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 NMBP08949 121 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SLC38A11Q08AI6 406 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 TMEM267Q0VDI3 215 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 CLINT1Q14677 625 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 LHFPL4Q7Z7J7 247 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SLC24A4Q8NFF2 622 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SAT2Q96F10 170 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 OR4C12Q96R67 309 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 WFDC1Q9HC57 220 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SIGLEC9Q9Y336 463 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 HILPDAQ9Y5L2 63 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 IGHV3-72A0A0B4J1Y9 119 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 C15orf62A8K5M9 175 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SOX15O60248 233 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 IFNA10P01566 189 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SAA4P35542 130 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 BPIFB3P59826 476 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 ERHP84090 104 aaKnown RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 PRB3Q04118 309 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 SSX2Q16385 188 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 PRSS8Q16651 343 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 VWC2Q2TAL6 325 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 BSXQ3C1V8 233 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 PPP1R27Q86WC6 154 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 TMED6Q8WW62 240 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 BSCL2Q96G97 398 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 TMEM147Q9BVK8 224 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 ZNF430Q9H8G1 570 aaPredicted RBP12.22□□□□□ -0.45
SCLT1-209ENST00000511426 KIAA1456Q9P272 454 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 LRRK2Q5S007 2527 aa12.22□□□□□ -0.45
SCLT1-209ENST00000511426 IGHV1-69DA0A0B4J2H0 117 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 CENPVL3A0A0U1RRI6 287 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 RRHO14718 337 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 FGF16O43320 207 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 TSPAN9O75954 239 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 IGHV1-69P01742 117 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 SNRNP70P08621 437 aaKnown RBP12.21□□□□□ -0.45
SCLT1-209ENST00000511426 FAM106CPP0CH98 169 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 NPY1RP25929 384 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 SULT1A2P50226 295 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 Q5PR19 223 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 SCGB1C1Q8TD33 95 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 C1RLQ9NZP8 487 aa12.21□□□□□ -0.45
SCLT1-209ENST00000511426 METTL1Q9UBP6 276 aaKnown RBP12.21□□□□□ -0.45
SCLT1-209ENST00000511426 NBR2O15453 112 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 IGKV1D-33P01593 117 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 IGKV1-33P01594 117 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 COMPP49747 757 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-209ENST00000511426 C2orf83Q53S99 150 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 SLC25A24Q6NUK1 477 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 HAPLN4Q86UW8 402 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 PSMG3Q9BT73 122 aaPredicted RBP12.2□□□□□ -0.46
SCLT1-209ENST00000511426 UQCC1Q9NVA1 299 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 ARID1AO14497 2285 aa12.2□□□□□ -0.46
SCLT1-209ENST00000511426 TRIM77I1YAP6 450 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 MPDU1O75352 247 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 SUB1P53999 127 aaKnown RBP eCLIP12.19□□□□□ -0.46
SCLT1-209ENST00000511426 DLK1P80370 383 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 ARL16Q0P5N6 197 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 MMDQ15546 238 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 LRRC75BQ2VPJ9 315 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 OR8G2PQ6IF36 304 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 Q8N6K4 173 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 EAF1Q96JC9 268 aaPredicted RBP12.19□□□□□ -0.46
SCLT1-209ENST00000511426 HIF1ANQ9NWT6 349 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 TIMM9Q9Y5J7 89 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 CHD6Q8TD26 2715 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 SNCAP37840 140 aa12.19□□□□□ -0.46
SCLT1-209ENST00000511426 RPL27AP46776 148 aaKnown RBP12.19□□□□□ -0.46
SCLT1-209ENST00000511426 BLOC1S1P78537 153 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms