RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 PTPRSQ13332 1948 aa1.15□□□□□ -2.22
TRAPPC11-207ENST00000511409 MEIKINA0A087WXM9 373 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 GGT3PA6NGU5 568 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 LEPROTO15243 131 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 ACOX3O15254 700 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 KRT7P08729 469 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 TRGC1P0CF51 173 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 ZNF705DP0CH99 300 aaPredicted RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 GPX2P18283 190 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 POLR2GP62487 172 aaKnown RBP eCLIP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 TNFAIP6P98066 277 aaPredicted RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 COQ5Q5HYK3 327 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 CDKL4Q5MAI5 379 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 ZNF550Q7Z398 422 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 TMEM86AQ8N2M4 240 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 RPP25LQ8N5L8 163 aaKnown RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 OTUD6BQ8N6M0 293 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 RNF133Q8WVZ7 376 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 MRPS26Q9BYN8 205 aaKnown RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR51I1Q9H343 314 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 LSM5Q9Y4Y9 91 aaKnown RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 PRRC2BQ5JSZ5 2229 aaKnown RBP1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 DISP1Q96F81 1524 aa1.15□□□□□ -2.23
TRAPPC11-207ENST00000511409 KRT75O95678 551 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 TNNC2P02585 160 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 ISG15P05161 165 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CALB1P05937 261 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 MSMBP08118 114 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 SRP19P09132 144 aaKnown RBP1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 ZNF705BP0CI00 300 aaPredicted RBP1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CCL5P13501 91 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 HLA-DMBP28068 263 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 AKR1C3P42330 323 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 MARCKSL1P49006 195 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CAV1Q03135 178 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 ACSM3Q53FZ2 586 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 GLT8D1Q68CQ7 371 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CD200R1LQ6Q8B3 271 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 C7orf65Q6ZTY9 151 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 C10orf67Q8IYJ2 551 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 ANKRD7Q92527 254 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 ROPN1LQ96C74 230 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CNBD2Q96M20 576 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 CHST6Q9GZX3 395 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 FUT9Q9Y231 359 aa1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 FCGBPQ9Y6R7 5405 aaPredicted RBP1.14□□□□□ -2.23
TRAPPC11-207ENST00000511409 NUMA1Q14980 2115 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 MALRD1Q5VYJ5 2156 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 SLC22A1O15245 554 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 TGOLN2O43493 480 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 NOS1APO75052 506 aaPredicted RBP1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 CIAO1O76071 339 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 SULT1A3P0DMM9 295 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 SULT1A4P0DMN0 295 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 FAM201AQ5SY85 155 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 HIST2H3PS2Q5TEC6 136 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 LPCAT4Q643R3 524 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 DEFB125Q8N687 156 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR1M1Q8NGA1 313 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 Q96M85 177 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 XPNPEP1Q9NQW7 623 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 RSL24D1Q9UHA3 163 aaKnown RBP1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 CPAMD8Q8IZJ3 1885 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 C9orf84Q5VXU9 1444 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 GREB1Q4ZG55 1949 aa1.13□□□□□ -2.23
TRAPPC11-207ENST00000511409 TRBV6-5A0A0K0K1A5 114 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 A0A1B0GV50 99 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 MEIS3P1A6NDR6 274 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 DCTN3O75935 186 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 EIF2B2P49770 351 aaKnown RBP1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 MAGOHP61326 146 aaKnown RBP1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 GRK1Q15835 563 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 NNATQ16517 81 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 MOGQ16653 247 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 FAM27BQ5VT28 67 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 FP248Q71RG6 208 aaPredicted RBP1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 RPS19BP1Q86WX3 136 aaKnown RBP1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 GPR32P1Q8NGA4 272 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 MBD3L1Q8WWY6 194 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 PTH2Q96A98 100 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 HSPB9Q9BQS6 159 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR8D2Q9GZM6 311 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 MED13Q9UHV7 2174 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 RTTNQ86VV8 2226 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 CUL9Q8IWT3 2517 aa1.12□□□□□ -2.23
TRAPPC11-207ENST00000511409 CCDC88CQ9P219 2028 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 SDK1Q7Z5N4 2213 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 MYH11P35749 1972 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 TRBV20OR9-2A0A075B6H5 130 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 OR51F1A6NGY5 319 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 F8W036 122 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 INMT-MINDY4F8WBC2 141 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 TRAPPC2LH3BP13 241 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 IGHV3-7P01780 117 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 EVX1P49640 407 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 RAB5BP61020 215 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 ELOBQ15370 118 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 NDUFA5Q16718 116 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 ARHGAP11BQ3KRB8 267 aa1.11□□□□□ -2.23
TRAPPC11-207ENST00000511409 C8orf74Q6P047 294 aa1.11□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms