RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 TRAPPC2BP0DI82 140 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 UBE2NP61088 152 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF141Q15928 474 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 TCEAL5Q5H9L2 206 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 LCNL1Q6ZST4 164 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 VN1R4Q7Z5H5 301 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 PPTC7Q8NI37 304 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 ZC2HC1AQ96GY0 325 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 MCEEQ96PE7 176 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF747Q9BV97 191 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 C1QTNF6Q9BXI9 259 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 HEBP1Q9NRV9 189 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 XCL2Q9UBD3 114 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 ANAPC10Q9UM13 185 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 BRCA1P38398 1863 aaKnown RBP5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 LCTP09848 1927 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 OR4C45A6NMZ5 311 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 A8MXK9 166 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 K7EPK0 472 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 PIRO00625 290 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 DPM2O94777 84 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 HLA-EP13747 358 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 HOXA5P20719 270 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 GADD45AP24522 165 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 Q5BKY6 102 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 UFSP1Q6NVU6 142 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 DNAJC24Q6P3W2 148 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 PTAR1Q7Z6K3 402 aaPredicted RBP5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 LHFPL1Q86WI0 220 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 ZDHHC22Q8N966 263 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 OR2T27Q8NH04 317 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 NMNAT3Q96T66 252 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 C19orf24Q9BVV8 132 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 PLXND1Q9Y4D7 1925 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 CKAP5Q14008 2032 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 LOC285556D6RIA3 1793 aa5.87□□□□□ -1.47
PDGFRA-206ENST00000508170 TRAV8-3A0A0A6YYJ7 113 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 MYL12BO14950 172 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 MRPS14O60783 128 aaKnown RBP5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF728P0DKX0 622 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 TAS2R46P59540 309 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 FAM19A3Q7Z5A8 133 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 RAB42Q8N4Z0 105 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 LINC00337Q8N6G1 96 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF441Q8N8Z8 693 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM75Q8N9X5 138 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF519Q8TB69 540 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 LMX1AQ8TE12 382 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 FAM3DQ96BQ1 224 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 LAMTOR3Q9UHA4 124 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 AMMECR1Q9Y4X0 333 aaPredicted RBP5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 CROCCQ5TZA2 2017 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 PHOX2AO14813 284 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 BTG2P78543 158 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 MEIG1Q5JSS6 88 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 FAM182AQ5T1J6 154 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 ZIC4Q8N9L1 334 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 PLPP5Q8NEB5 264 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 OR4C16Q8NGL9 310 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 PAXXQ9BUH6 204 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 FAM49BQ9NUQ9 324 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 COMMD3Q9UBI1 195 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 PCTPQ9UKL6 214 aa5.86□□□□□ -1.47
PDGFRA-206ENST00000508170 TRDV1A0A1B0GX56 115 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF670-ZNF695F2Z2N8 137 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 CCDC179H3BU77 68 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 FOXS1O43638 330 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 C1QAP02745 245 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 PSMB2P49721 201 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 EIF3IQ13347 325 aaKnown RBP5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 AMMECR1LQ6DCA0 310 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM14EPQ6UXP3 125 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 UNQ9165/PRO28630Q6UXU0 137 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 URB1-AS1Q96HZ7 61 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 GGTLC1Q9BX51 225 aa5.85□□□□□ -1.47
PDGFRA-206ENST00000508170 A0A0G2JMM0 328 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 A0A1W2PPB8 328 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 SSC5DA1L4H1 1573 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 KIR3DP1A8MWS1 328 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 UPK2O00526 184 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ISLRO14498 428 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 IL7P13232 177 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ERCC8Q13216 396 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF846Q147U1 533 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ODF3L2Q3SX64 289 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ABCA11PQ4W5N1 156 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 OR11H7Q8NGC8 314 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 TMEM131Q92545 1883 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ZNF629Q9UEG4 869 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 ANK1P16157 1881 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 PGPA6NDG6 321 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 GGT3PA6NGU5 568 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 GGTLC3B5MD39 225 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 LY6LH3BQJ8 138 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 GUCA1AP43080 201 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 PRR30Q53SZ7 412 aaPredicted RBP5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 SELENOIQ9C0D9 397 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 PROCRQ9UNN8 238 aa5.84□□□□□ -1.47
PDGFRA-206ENST00000508170 MGAMO43451 1857 aa5.84□□□□□ -1.48
PDGFRA-206ENST00000508170 TRBV19A0A075B6N1 114 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms