RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 THAP7Q9BT49 309 aaPredicted RBP6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 EHFQ9NZC4 300 aa6.91□□□□□ -1.3
PDLIM5-209ENST00000506632 A8MZ25 164 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 SULT1C2O00338 296 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 UPK2O00526 184 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 OR2J3O76001 311 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 APOA1P02647 267 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 FRMD6-AS1P0C7T7 363 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 SMIM18P0DKX4 95 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 MYOD1P15172 320 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 AREGP15514 252 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 NQO2P16083 231 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 HLA-GP17693 338 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 PSMB6P28072 239 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 PRSS3P35030 304 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 TAS2R46P59540 309 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 OR2B8PP59922 312 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 HERV-K104P61576 105 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 VBP1P61758 197 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 RPEL1Q2QD12 228 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 C15orf32Q32M92 178 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 FAM209BQ5JX69 171 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 ADAMTSL5Q6ZMM2 481 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 ANKRD13BQ86YJ7 626 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 LYSMD2Q8IV50 215 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 SBSPONQ8IVN8 264 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 CADM3Q8N126 398 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 OR51H1Q8NH63 302 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 CD300LFQ8TDQ1 290 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 BORCS5Q969J3 196 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 FYTTD1Q96QD9 318 aaKnown RBP6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 ZNF2Q9BSG1 426 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 FXYD6Q9H0Q3 95 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 PLEKHA2Q9HB19 425 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 PLA2G2EQ9NZK7 142 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 COMMD9Q9P000 198 aa6.9□□□□□ -1.3
PDLIM5-209ENST00000506632 NBEAL2Q6ZNJ1 2754 aa6.9□□□□□ -1.31
PDLIM5-209ENST00000506632 HUWE1Q7Z6Z7 4374 aaKnown RBP6.9□□□□□ -1.31
PDLIM5-209ENST00000506632 TRAV3A0A0B4J244 114 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 IGLC7A0M8Q6 106 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 PGLYRP1O75594 196 aaPredicted RBP6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 S1PR2O95136 353 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 GABARAPO95166 117 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 NDUFB8O95169 186 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 PMP2P02689 132 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 ELK1P19419 428 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 F2RP25116 425 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 HRH1P35367 487 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 CTF1Q16619 201 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 TATDN3Q17R31 274 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 C4orf46Q504U0 113 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 AADACL3Q5VUY0 350 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 OR5H2Q8NGV7 314 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 CCDC140Q96MF4 163 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 SRSF8Q9BRL6 282 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 NAA50Q9GZZ1 169 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 SCPEP1Q9HB40 452 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 TMEM140Q9NV12 185 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 C19orf73Q9NVV2 129 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 COMMD3Q9UBI1 195 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 FBXL7Q9UJT9 491 aa6.89□□□□□ -1.31
PDLIM5-209ENST00000506632 IGLV11-55A0A075B6I3 123 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 DPPA5A6NC42 116 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 H0Y980 276 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 LGALS9O00182 355 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 DHFRP00374 187 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 RLN1P04808 185 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 IGHV4-30-4P0DP06 118 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 HIST1H1BP16401 226 aaKnown RBP6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 HLA-DMAP28067 261 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 ZNF585BQ52M93 769 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 ANKRD39Q53RE8 183 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 Q8N402 240 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 OR2K2Q8NGT1 345 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 OR6F1Q8NGZ6 308 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 HRASLSQ9HDD0 168 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 PEMTQ9UBM1 199 aa6.88□□□□□ -1.31
PDLIM5-209ENST00000506632 SMIM31A0A1B0GVY4 71 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 IZUMO1RA6ND01 250 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 MFSD2BA6NFX1 497 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 MARCH11A6NNE9 402 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 PPP5D1E7EU14 171 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 GPR31O00270 319 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 HPGDSO60760 199 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 GGCTO75223 188 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 REG1AP05451 166 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 RCVRNP35243 200 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 RORCP51449 518 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 UCP3P55916 312 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 THOC7Q6I9Y2 204 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 LCN12Q6JVE5 192 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 GPHB5Q86YW7 130 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 SNX29P2Q8IUI4 249 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 CMTM1Q8IZ96 169 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 DMBX1Q8NFW5 382 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 FCAMRQ8WWV6 532 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 DGCR14Q96DF8 476 aaKnown RBP6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 RCHY1Q96PM5 261 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 TM2D3Q9BRN9 247 aa6.87□□□□□ -1.31
PDLIM5-209ENST00000506632 QTRT1Q9BXR0 403 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms