RNA–Protein interactions for RNA: ENST00000495955.5

GAPVD1-219, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 1 (best) BASIC

Gene GAPVD1, Length 5,309 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-219ENST00000495955 SPG11Q96JI7 2443 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 SPTBN5Q9NRC6 3674 aaKnown RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 PTPN13Q12923 2485 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 MBPP02686 304 aaPredicted RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 HIST1H1BP16401 226 aaKnown RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 PSMB3P49720 205 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 RND2P52198 227 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 HERPUD1Q15011 391 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 NSUN5P1Q3KNT7 163 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 TEPPQ6URK8 271 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 TEX45Q8NA69 505 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 OR4X1Q8NH49 305 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 C18orf12Q96KH6 178 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 TMEM231Q9H6L2 316 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 SERTAD4Q9NUC0 356 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 IGHV3-35A0A0C4DH35 117 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 TCRBV4S1A1TA0A5B7 111 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 H0YJW9 148 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 I3L521 148 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 AP4M1O00189 453 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 MMP23AO75900 390 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 C16orf82Q7Z2V1 217 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 PCNPQ8WW12 178 aaKnown RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 SRSF12Q8WXF0 261 aaKnown RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 DAZAP1Q96EP5 407 aaKnown RBP7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 SOSTQ9BQB4 213 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 RABAC1Q9UI14 185 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 PKD1L2Q7Z442 2459 aa7.72□□□□□ -1.17
GAPVD1-219ENST00000495955 A0A0G2JLM5 398 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 FAM90A26D6RGX4 464 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 UPK2O00526 184 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 CD1BP29016 333 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 LINC00205P59089 165 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 C11orf91Q3C1V1 193 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 BAP18Q8IXM2 172 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 CDC42EP3Q9UKI2 254 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 TCTE3Q8IZS6 198 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 SIGLECL1Q8N7X8 197 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 BLNKQ8WV28 456 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 IFI27L2Q9H2X8 130 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 NCOR1P1Q9H4R4 102 aa7.71□□□□□ -1.17
GAPVD1-219ENST00000495955 PCSK5Q92824 1860 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 HOXB4P17483 251 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 GUCA2BQ16661 112 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 OR8I2Q8N0Y5 310 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 NABP2Q9BQ15 211 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 TRIOO75962 3097 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF735P0CB33 412 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 RPL30P62888 115 aaKnown RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 PSG5Q15238 335 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 FAM53AQ6NSI3 398 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 GALNT14Q96FL9 552 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 OR4C12Q96R67 309 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 AAMDCQ9H7C9 122 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 NCKAP5O14513 1909 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 MAS1LP35410 378 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 PEA15Q15121 130 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 C11orf71Q6IPW1 123 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 RBPMS2Q6ZRY4 209 aaKnown RBP7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 ZNF383Q8NA42 475 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 WNT10AQ9GZT5 417 aa7.71□□□□□ -1.18
GAPVD1-219ENST00000495955 PSMB11A5LHX3 300 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 RBFOX2O43251 390 aaKnown RBP eCLIP7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 PAFAH1B2P68402 229 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 Q6ZS49 121 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 CREBBPQ92793 2442 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 TFPI2P48307 235 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 EXOSC2Q13868 293 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 TRAV41A0A0B4J266 112 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 IGKV1-6A0A0C4DH72 117 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 C7orf66A4D0T2 115 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 HOXA3O43365 443 aaPredicted RBP7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 TCF21O43680 179 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 OR10J4P0C629 311 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 KRTAP10-9P60411 292 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 UBE2G2P60604 165 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 UBE2G1P62253 170 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 FAM120AOSQ5T036 256 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 METTL26Q96S19 204 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 NPVFQ9HCQ7 196 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 GNG13Q9P2W3 67 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 YLPM1P49750 1951 aaKnown RBP7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 LINC00473A8K010 186 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 DEDDO75618 318 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 RNF224P0DH78 156 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 IGHV4-38-2P0DP08 117 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 RHOBP62745 196 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 NHLH2Q02577 135 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 C10orf113Q5VZT2 155 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 COMMD7Q86VX2 200 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 OR5AC2Q9NZP5 309 aa7.7□□□□□ -1.18
GAPVD1-219ENST00000495955 KIAA2026Q5HYC2 2103 aa7.69□□□□□ -1.18
GAPVD1-219ENST00000495955 C15orf65H3BRN8 121 aa7.69□□□□□ -1.18
GAPVD1-219ENST00000495955 SLC25A4P12235 298 aa7.69□□□□□ -1.18
GAPVD1-219ENST00000495955 OR10J1P30954 320 aa7.69□□□□□ -1.18
GAPVD1-219ENST00000495955 KIAA1549Q9HCM3 1950 aa7.69□□□□□ -1.18
GAPVD1-219ENST00000495955 CPAMD8Q8IZJ3 1885 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms