RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 KLK9Q9UKQ9 250 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 RAB22AQ9UL26 194 aa4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 AK6Q9Y3D8 172 aaKnown RBP4.78□□□□□ -1.64
PRPF40A-210ENST00000489741 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 EBAG9O00559 213 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 DENRO43583 198 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 ACTL6BO94805 426 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 IFNA6P05013 189 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 OR9G9P0C7N8 305 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 RRASP10301 218 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 DUTP33316 252 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 KIR2DS2P43631 304 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 CLDN12P56749 244 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 RPS25P62851 125 aaKnown RBP4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 FABP5Q01469 135 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 DEFA5Q01523 94 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF45Q02386 682 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 RCN1Q15293 331 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 RAB11BQ15907 218 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 TATDN3Q17R31 274 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 RPEL1Q2QD12 228 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 DEFB114Q30KQ6 69 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 LAX1Q8IWV1 398 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 TTC9CQ8N5M4 171 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 TMEM217Q8N7C4 229 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 OR10J5Q8NHC4 309 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 UFD1Q92890 307 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 ADTRPQ96IZ2 230 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 HARBI1Q96MB7 349 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 OR2D2Q9H210 308 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 TUBA4BQ9H853 241 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 PLGRKTQ9HBL7 147 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 ZC4H2Q9NQZ6 224 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF230Q9UIE0 474 aaPredicted RBP4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 V9GY05 133 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 KMT2AQ03164 3969 aa4.77□□□□□ -1.65
PRPF40A-210ENST00000489741 IGKV1D-8A0A087WSZ0 117 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 TRAV1-2A0A0B4J238 106 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 FAM223BA6NKX1 122 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 LGALS9O00182 355 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 MFNGO00587 321 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 BET1O15155 118 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 ARL6IP5O75915 188 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 CD7P09564 240 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 PSMA1P25786 263 aaKnown RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 CALRP27797 417 aaKnown RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 RANBP1P43487 201 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 PSMD7P51665 324 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 BRWD1-AS2P59051 145 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 RHOGP84095 191 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 MLLT11Q13015 90 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 EIF4EBP1Q13541 118 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 MED22Q15528 200 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 TRAM1Q15629 374 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 VMA21Q3ZAQ7 101 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 GTSCR1Q86UQ5 136 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 GPHB5Q86YW7 130 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 FAM223AQ8IWN6 122 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 H1FOOQ8IZA3 346 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 CADM3Q8N126 398 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 OR10R2Q8NGX6 335 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 SRSF12Q8WXF0 261 aaKnown RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 RAB3CQ96E17 227 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 NEURL2Q9BR09 285 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 CENPOQ9BU64 300 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 WDR12Q9GZL7 423 aaKnown RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 ZNF430Q9H8G1 570 aaPredicted RBP4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 RETNQ9HD89 108 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 SCN3BQ9NY72 215 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 PEMTQ9UBM1 199 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 CEPT1Q9Y6K0 416 aa4.76□□□□□ -1.65
PRPF40A-210ENST00000489741 FRAS1Q86XX4 4008 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 A0A0B4J203 849 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 A0A1B0GW64 132 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 C2orf70A6NJV1 201 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 IFITM5A6NNB3 132 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 OR11H12B2RN74 326 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 TEX22C9J3V5 150 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 E7EUB6 86 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 CRYZL1O95825 349 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 HLA-DQB1P01920 261 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 PRH1P02810 166 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 CRYGCP07315 174 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 SAA1P0DJI8 122 aaPredicted RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 APELAP0DMC3 54 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 FOLR2P14207 255 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 HIST1H1DP16402 221 aaKnown RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 GNB3P16520 340 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 TNFSF8P32971 234 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 RPL30P62888 115 aaKnown RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 ATP5G2Q06055 141 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 CDK10Q15131 360 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 TNXAQ16473 311 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 RTL8BQ17RB0 113 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 IDO2Q6ZQW0 420 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 PRSS48Q7RTY5 328 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 NR2C2APQ86WQ0 139 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 PUSL1Q8N0Z8 303 aaKnown RBP4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 DEFB125Q8N687 156 aa4.75□□□□□ -1.65
PRPF40A-210ENST00000489741 NECAP1Q8NC96 275 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms