RNA–Protein interactions for RNA: ENST00000489045.5

COL9A3-213, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-213ENST00000489045 THAP7Q9BT49 309 aaPredicted RBP17.46■□□□□ 0.39
COL9A3-213ENST00000489045 FUNDC2Q9BWH2 189 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 S4R3C0 116 aa17.46■□□□□ 0.39
COL9A3-213ENST00000489045 A8MZ25 164 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 UPK2O00526 184 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 GGCTO75223 188 aaKnown RBP17.45■□□□□ 0.38
COL9A3-213ENST00000489045 NAT1P18440 290 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 MECP2P51608 486 aaKnown RBP17.45■□□□□ 0.38
COL9A3-213ENST00000489045 TAS2R46P59540 309 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 OR2B8PP59922 312 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 ADAMTSL5Q6ZMM2 481 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 CD300LFQ8TDQ1 290 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 CCDC140Q96MF4 163 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 FXYD6Q9H0Q3 95 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 PLEKHA2Q9HB19 425 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 TMEM140Q9NV12 185 aa17.45■□□□□ 0.38
COL9A3-213ENST00000489045 RLN1P04808 185 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 DEFA4P12838 97 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 HIST1H1BP16401 226 aaKnown RBP17.44■□□□□ 0.38
COL9A3-213ENST00000489045 VBP1P61758 197 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 KLK9Q2XQG4 91 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 GTSCR1Q86UQ5 136 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 DMBX1Q8NFW5 382 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 OR2K2Q8NGT1 345 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 TM2D3Q9BRN9 247 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 COMMD9Q9P000 198 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 COMMD3Q9UBI1 195 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 KLK9Q9UKQ9 250 aa17.44■□□□□ 0.38
COL9A3-213ENST00000489045 IGLV11-55A0A075B6I3 123 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 OR2C1O95371 312 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 RPA2P15927 270 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 ARL3P36405 182 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 CLEC19AQ6UXS0 136 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 EEF1AKMT3Q96AZ1 226 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 COMMD5Q9GZQ3 224 aa17.43■□□□□ 0.38
COL9A3-213ENST00000489045 IGLC7A0M8Q6 106 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 C3orf84H3BNL1 204 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 PGLYRP1O75594 196 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-213ENST00000489045 EDN2P20800 178 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 HLA-DMAP28067 261 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 HRH1P35367 487 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 CD300EQ496F6 205 aaPredicted RBP17.42■□□□□ 0.38
COL9A3-213ENST00000489045 DYNLRB2Q8TF09 96 aa17.42■□□□□ 0.38
COL9A3-213ENST00000489045 MFSD2BA6NFX1 497 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 C2orf70A6NJV1 201 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 APOA1P02647 267 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 F2RP25116 425 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 ERVK-16P61578 105 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 LYSMD2Q8IV50 215 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 OR6F1Q8NGZ6 308 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 GPX8Q8TED1 209 aa17.41■□□□□ 0.38
COL9A3-213ENST00000489045 DNAH7Q8WXX0 4024 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 SMIM31A0A1B0GVY4 71 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 MARCH11A6NNE9 402 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 LGALS9O00182 355 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 FGF2P09038 288 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 SNX29P2Q8IUI4 249 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 CMTM1Q8IZ96 169 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 MUC7Q8TAX7 377 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 CMTM3Q96MX0 182 aa17.4■□□□□ 0.38
COL9A3-213ENST00000489045 SRSF8Q9BRL6 282 aaKnown RBP17.4■□□□□ 0.38
COL9A3-213ENST00000489045 QTRT1Q9BXR0 403 aaKnown RBP17.4■□□□□ 0.38
COL9A3-213ENST00000489045 RYR3Q15413 4870 aa17.39■□□□□ 0.38
COL9A3-213ENST00000489045 GPR31O00270 319 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 FOLR2P14207 255 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 LPAR6P43657 344 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 GPHB5Q86YW7 130 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 OR10W1Q8NGF6 305 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 FCAMRQ8WWV6 532 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 DGCR14Q96DF8 476 aaKnown RBP17.39■□□□□ 0.37
COL9A3-213ENST00000489045 CXorf58Q96LI9 332 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 TUBA4BQ9H853 241 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 SCPEP1Q9HB40 452 aa17.39■□□□□ 0.37
COL9A3-213ENST00000489045 TRBV7-1A0A0A6YYK4 115 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 HPGDSO60760 199 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 ELK1P19419 428 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 CD81P60033 236 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 DEFB114Q30KQ6 69 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 CACNG8Q8WXS5 425 aa17.38■□□□□ 0.37
COL9A3-213ENST00000489045 TEX50A0A1B0GTY4 177 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 ZNF785A8K8V0 405 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 KRASP01116 189 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 TSPAN5P62079 268 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 ZNF585BQ52M93 769 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 PHLDA2Q53GA4 152 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 THOC7Q6I9Y2 204 aaKnown RBP17.37■□□□□ 0.37
COL9A3-213ENST00000489045 LAX1Q8IWV1 398 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 PLEKHA3Q9HB20 300 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 ZC4H2Q9NQZ6 224 aa17.37■□□□□ 0.37
COL9A3-213ENST00000489045 TECRQ9NZ01 308 aaKnown RBP17.37■□□□□ 0.37
COL9A3-213ENST00000489045 TRAPPC2P0DI81 140 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 TRAPPC2BP0DI82 140 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 GPR183P32249 361 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 RCVRNP35243 200 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 G6PCP35575 357 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 RORCP51449 518 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 WT1-ASQ06250 92 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 HAGHQ16775 308 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 FAM106AQ4KMX7 169 aa17.36■□□□□ 0.37
COL9A3-213ENST00000489045 GDPD1Q8N9F7 314 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms