RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 LSM4Q9Y4Z0 139 aaKnown RBP4.52□□□□□ -1.69
CDHR3-213ENST00000488386 S4R3C0 116 aa4.52□□□□□ -1.69
CDHR3-213ENST00000488386 HMX3A6NHT5 357 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 MSGN1A6NI15 193 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 E7EUB6 86 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 MRPS14O60783 128 aaKnown RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ACTL6BO94805 426 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 IGHV3-23P01764 117 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 HSPB1P04792 205 aaKnown RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 RPA2P15927 270 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 AADACP22760 399 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 SERPINB10P48595 397 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 BRWD1-AS2P59051 145 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 FXYD4P59646 89 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 RUNX1Q01196 453 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF45Q02386 682 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 TMEM267Q0VDI3 215 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 AKIRIN2Q53H80 203 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 KCTD9Q7L273 389 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 SSX9Q7RTT3 188 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF645Q8N7E2 425 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 TCTEX1D2Q8WW35 142 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 FCGR1BQ92637 280 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 RPL36ALQ969Q0 106 aaKnown RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 RNF5Q99942 180 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF430Q9H8G1 570 aaPredicted RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 ANXA10Q9UJ72 324 aa4.51□□□□□ -1.69
CDHR3-213ENST00000488386 RBMX2Q9Y388 322 aaKnown RBP4.51□□□□□ -1.69
CDHR3-213ENST00000488386 C13orf42A0A1B0GVH6 325 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 A0A1B0GW64 132 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 RAMP3O60896 148 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 HLA-DQB1P01920 261 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 REG1AP05451 166 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 GP9P14770 177 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 GALP22466 123 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 DTYMKP23919 212 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 FCGR2CP31995 323 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 SYNJ2BPP57105 145 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 ARPC4P59998 168 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 UBE2KP61086 200 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 PITPNAQ00169 270 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 CBX3Q13185 183 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 EIF4EBP1Q13541 118 aaPredicted RBP4.5□□□□□ -1.69
CDHR3-213ENST00000488386 PRSS8Q16651 343 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 RTL8BQ17RB0 113 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 VMA21Q3ZAQ7 101 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 CNIH2Q6PI25 160 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 Q6ZS49 121 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 TPRA1Q86W33 373 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 SBSPONQ8IVN8 264 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 TCTEX1D1Q8N7M0 179 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 BEST4Q8NFU0 473 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 SECTM1Q8WVN6 248 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 SRSF12Q8WXF0 261 aaKnown RBP4.5□□□□□ -1.69
CDHR3-213ENST00000488386 SNAPC3Q92966 411 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 YTHDF1Q9BYJ9 559 aaKnown RBP4.5□□□□□ -1.69
CDHR3-213ENST00000488386 GHITMQ9H3K2 345 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.5□□□□□ -1.69
CDHR3-213ENST00000488386 OR2W1Q9Y3N9 320 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 TNCP24821 2201 aa4.5□□□□□ -1.69
CDHR3-213ENST00000488386 TRAV3A0A0B4J244 114 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 IZUMO1RA6ND01 250 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 PPP5D1E7EU14 171 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 SULT1C2O00338 296 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 AIREO43918 545 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 OR2J3O76001 311 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 HLA-AP01891 365 aaKnown RBP4.49□□□□□ -1.69
CDHR3-213ENST00000488386 PMP2P02689 132 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 OR9G9P0C7N8 305 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 RRASP10301 218 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 AREGP15514 252 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 CD40LGP29965 261 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 LGALS7P47929 136 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 NCS1P62166 190 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 CDK10Q15131 360 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 ANXA2RQ3ZCQ2 193 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 KCTD21Q4G0X4 260 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 PYHIN1Q6K0P9 492 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF818PQ6ZRF7 136 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 ZNF429Q86V71 674 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 TMEM17Q86X19 198 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 HOGA1Q86XE5 327 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 TEX45Q8NA69 505 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 ADAD2Q8NCV1 583 aaKnown RBP4.49□□□□□ -1.69
CDHR3-213ENST00000488386 OR13F1Q8NGS4 319 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 PRSS3P2Q8NHM4 247 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 YIPF6Q96EC8 236 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 OR4C12Q96R67 309 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 NAA50Q9GZZ1 169 aaKnown RBP4.49□□□□□ -1.69
CDHR3-213ENST00000488386 DCSTAMPQ9H295 470 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 SLA2Q9H6Q3 261 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 AUNIPQ9H7T9 357 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 ZC4H2Q9NQZ6 224 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 U3KQK5 164 aa4.49□□□□□ -1.69
CDHR3-213ENST00000488386 SORL1Q92673 2214 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 TEX22C9J3V5 150 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 BMPR1BO00238 502 aa4.48□□□□□ -1.69
CDHR3-213ENST00000488386 KBTBD11O94819 623 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms