RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 Q8N6K4 173 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 Q8N9W7 124 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 OR4A16Q8NH70 328 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 OR1S1Q8NH92 325 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 ABHD5Q8WTS1 349 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 RBM14Q96PK6 669 aaKnown RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 RASL11BQ9BPW5 248 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 FAM103A1Q9BTL3 118 aaKnown RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 QTRT1Q9BXR0 403 aaKnown RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 MAGT1Q9H0U3 335 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 ZNF430Q9H8G1 570 aaPredicted RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 COMMD9Q9P000 198 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 LINC00527Q9UJ94 153 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 VPREB3Q9UKI3 123 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 SIGLEC9Q9Y336 463 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 MMP24Q9Y5R2 645 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 LINC01548A6NM66 108 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 SNAPC5O75971 98 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 ACTL6BO94805 426 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 ATG12O94817 140 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 KBTBD11O94819 623 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 CA2P00918 260 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 IFNA17P01571 189 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 FAM157CP0CG43 387 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 DYNLT3P51808 116 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 UBE2KP61086 200 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 NMSQ5H8A3 153 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 CXorf66Q5JRM2 361 aaPredicted RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 THOC7Q6I9Y2 204 aaKnown RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 C11orf87Q6NUJ2 197 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 GSG1LQ6UXU4 331 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 LRTM2Q8N967 370 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 GRPEL2Q8TAA5 225 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 ZNF418Q8TF45 676 aaPredicted RBP5.11□□□□□ -1.59
HERC4-210ENST00000480158 RAB18Q9NP72 206 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 PITPNC1Q9UKF7 332 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 TMED3Q9Y3Q3 217 aa5.11□□□□□ -1.59
HERC4-210ENST00000480158 FAM181BA6NEQ2 426 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 E7EUB6 86 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 UPK2O00526 184 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 AMY1AP04745 511 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 SULT1A3P0DMM9 295 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 SULT1A4P0DMN0 295 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 RPL8P62917 257 aaKnown RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 SCGB2A2Q13296 93 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 C5orf64Q2M2E5 130 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 PUSL1Q8N0Z8 303 aaKnown RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 FAM71E2Q8N5Q1 922 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 C5orf56Q8N8D9 126 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 NPBQ8NG41 125 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 OR5R1Q8NH85 324 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 VSTM2AQ8TAG5 236 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 IL22RA2Q969J5 263 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 FYTTD1Q96QD9 318 aaKnown RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 HSPB9Q9BQS6 159 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 FAM212BQ9NTI7 297 aaPredicted RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 C1RLQ9NZP8 487 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 MOB4Q9Y3A3 225 aa5.1□□□□□ -1.59
HERC4-210ENST00000480158 ANK3Q12955 4377 aaKnown RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 SETD2Q9BYW2 2564 aaPredicted RBP5.1□□□□□ -1.59
HERC4-210ENST00000480158 SMLR1H3BR10 107 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 ST8SIA3O43173 380 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 GPR137BO60478 399 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 REG1AP05451 166 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 S100A10P60903 97 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 CX3CL1P78423 397 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 CD300CQ08708 224 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 SMCO1Q147U7 214 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 AANATQ16613 207 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 PRSS8Q16651 343 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 MRGPRG-AS1Q2M3A8 158 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 TEX45Q8NA69 505 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 OR10W1Q8NGF6 305 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 OR5M8Q8NGP6 311 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 LSM10Q969L4 123 aaKnown RBP5.09□□□□□ -1.59
HERC4-210ENST00000480158 RNF5Q99942 180 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 AIFM2Q9BRQ8 373 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 COMMD5Q9GZQ3 224 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 PRDM13Q9H4Q3 707 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 PARP11Q9NR21 331 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.09□□□□□ -1.59
HERC4-210ENST00000480158 OR51B2Q9Y5P1 312 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 HMX3A6NHT5 357 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 MSGN1A6NI15 193 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 KCNAB3O43448 404 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 NDUFA3O95167 84 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 CRYGBP07316 175 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 P0C879 139 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 HLA-GP17693 338 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 BCAP31P51572 246 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 POLR2GP62487 172 aaKnown RBP eCLIP5.09□□□□□ -1.59
HERC4-210ENST00000480158 FXYD3Q14802 87 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 POU2AF1Q16633 256 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 TMEM167AQ8TBQ9 72 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 ZNF436Q9C0F3 470 aaPredicted RBP5.09□□□□□ -1.59
HERC4-210ENST00000480158 RANGRFQ9HD47 186 aaPredicted RBP5.09□□□□□ -1.59
HERC4-210ENST00000480158 BET1LQ9NYM9 111 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 LSM5Q9Y4Y9 91 aaKnown RBP5.09□□□□□ -1.59
HERC4-210ENST00000480158 WSB1Q9Y6I7 421 aa5.09□□□□□ -1.59
HERC4-210ENST00000480158 JMJD1CQ15652 2540 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms