RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 C15orf61A6NNL5 157 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 SRRM4A7MD48 611 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 E5RGE8 158 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 K7EPK0 472 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 HOXA3O43365 443 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 KCNAB3O43448 404 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 SSSCA1O60232 199 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 TSPAN9O75954 239 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 SCAF4O95104 1147 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 NDUFA3O95167 84 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 PAX6P26367 422 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 S100A11P31949 105 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 SUB1P53999 127 aaKnown RBP eCLIP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 HSPE1P61604 102 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 RPL23AP62750 156 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 GNB1P62873 340 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 ERHP84090 104 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 TMEM267Q0VDI3 215 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 OR2F1Q13607 317 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 OPCMLQ14982 345 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 PRSS8Q16651 343 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 ACOT7LQ6ZUV0 252 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 TMUB2Q71RG4 321 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 ZNF429Q86V71 674 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 FAM71E2Q8N5Q1 922 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 SIGLECL1Q8N7X8 197 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 OR11H4Q8NGC9 324 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 RAB40CQ96S21 281 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 NPFFR1Q9GZQ6 430 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 PLEKHA3Q9HB20 300 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 HEYLQ9NQ87 328 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 PLSCR3Q9NRY6 295 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 TNFRSF19Q9NS68 423 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 PAIP2BQ9ULR5 123 aaKnown RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 FOXA2Q9Y261 457 aaPredicted RBP8.28□□□□□ -1.08
COL12A1-206ENST00000474564 NSG2Q9Y328 171 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 BOLA1Q9Y3E2 137 aa8.28□□□□□ -1.08
COL12A1-206ENST00000474564 A6NDX4 124 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 SYNGR2O43760 224 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 DEDDO75618 318 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 IGLV2-23P01705 113 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 IGHV4-59P01825 116 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 MBPP02686 304 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 FAM157CP0CG43 387 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 SNCAP37840 140 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 RPL27AP46776 148 aaKnown RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 HOXA1P49639 335 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 COMPP49747 757 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 CAV2P51636 162 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 ATP5IP56385 69 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 OR2B8PP59922 312 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 RELBQ01201 579 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 FXYD3Q14802 87 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 C9orf152Q5JTZ5 239 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF562Q6V9R5 426 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 Q71RC1 249 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 Q8N6K4 173 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 ARPC5LQ9BPX5 153 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 SRSF8Q9BRL6 282 aaKnown RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 GON7Q9BXV9 100 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 PRSS22Q9GZN4 317 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 SLC25A31Q9H0C2 315 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 MAGT1Q9H0U3 335 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF430Q9H8G1 570 aaPredicted RBP8.27□□□□□ -1.09
COL12A1-206ENST00000474564 OR5AC2Q9NZP5 309 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 TNFSF18Q9UNG2 199 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 CENPEQ02224 2701 aa8.27□□□□□ -1.09
COL12A1-206ENST00000474564 MDFIC2A0A1B0GVS7 189 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 INAFM1C9JVW0 142 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 TRIM77I1YAP6 450 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 HLA-DRB1P01911 266 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 OR9G9P0C7N8 305 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 RPL12P30050 165 aaKnown RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 RPL15P61313 204 aaKnown RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 UBA52P62987 128 aaKnown RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 EIF5AP63241 154 aaKnown RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 ID3Q02535 119 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 TNFRSF9Q07011 255 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF345Q14585 488 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 LGALSLQ3ZCW2 172 aaPredicted RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 TMEM65Q6PI78 240 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 TMEM219Q86XT9 240 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 OR4D5Q8NGN0 318 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 RITA1Q96K30 269 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 ZNF471Q9BX82 626 aaPredicted RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 QTRT1Q9BXR0 403 aaKnown RBP8.26□□□□□ -1.09
COL12A1-206ENST00000474564 TMEM14BQ9NUH8 114 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 HSPB7Q9UBY9 170 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 WNK2Q9Y3S1 2297 aa8.26□□□□□ -1.09
COL12A1-206ENST00000474564 PDZD2O15018 2839 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 BORCS7-ASMTA0A0B4J1R7 106 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 A0A0G2JRQ6 117 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 TEX50A0A1B0GTY4 177 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 G3V3Q6 166 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 BCL2L11O43521 198 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 TCF21O43680 179 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 PITX3O75364 302 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CRLF1O75462 422 aa8.25□□□□□ -1.09
COL12A1-206ENST00000474564 CA2P00918 260 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms