RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 GNG13Q9P2W3 67 aa11.83□□□□□ -0.51
COL5A1-205ENST00000464187 VPS13CQ709C8 3753 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 MALRD1Q5VYJ5 2156 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 TRAV3A0A0B4J244 114 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 IFNA17P01571 189 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 IGKV1D-33P01593 117 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 IGKV1-33P01594 117 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 ARG1P05089 322 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 GNG10P50151 68 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 PDLIM4P50479 330 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 GNB2P62879 340 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 RELBQ01201 579 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 HNF4GQ14541 408 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 HEPN1Q6WQI6 88 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 C15orf54Q8N8G6 183 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 OR4A16Q8NH70 328 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 OR4S2Q8NH73 311 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 UNKLQ9H9P5 680 aaKnown RBP11.83□□□□□ -0.52
COL5A1-205ENST00000464187 TMEM140Q9NV12 185 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 MLXQ9UH92 298 aa11.83□□□□□ -0.52
COL5A1-205ENST00000464187 PUS1Q9Y606 427 aaKnown RBP eCLIP11.83□□□□□ -0.52
COL5A1-205ENST00000464187 CRYBA1P05813 215 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 THBS3P49746 956 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 CEBPGP53567 150 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 SPCS3P61009 180 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 TMEM30BQ3MIR4 351 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 PDLIM3Q53GG5 364 aaPredicted RBP11.82□□□□□ -0.52
COL5A1-205ENST00000464187 LYG1Q8N1E2 194 aa11.82□□□□□ -0.52
COL5A1-205ENST00000464187 MAP1LC3B2A6NCE7 125 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 EIF3GO75821 320 aaKnown RBP eCLIP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 BCL2P10415 239 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 MDKP21741 143 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 VDAC2P45880 294 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 KRTAP10-9P60411 292 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 RPP25LQ8N5L8 163 aaKnown RBP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 ZNF383Q8NA42 475 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 OR10A7Q8NGE5 316 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 OR52E5Q8NH55 327 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 HIST1H2BAQ96A08 127 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 PERPQ96FX8 193 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 SSBP3Q9BWW4 388 aaPredicted RBP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 MAP1LC3BQ9GZQ8 125 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 RPUSD1Q9UJJ7 312 aaKnown RBP11.81□□□□□ -0.52
COL5A1-205ENST00000464187 DOPEY2Q9Y3R5 2298 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 PPIAL4CA0A0B4J2A2 164 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 ZFP92A6NM28 416 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 H3BQ15 152 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 PPIAL4GP0DN37 164 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 DLX6P56179 175 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 OR10G4Q8NGN3 311 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 C8orf46Q8TAG6 207 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 FAM168AQ92567 244 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 NPCDR1Q9BY65 106 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 TUBA4BQ9H853 241 aa11.81□□□□□ -0.52
COL5A1-205ENST00000464187 A0A1W2PPE2 198 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 A0A1W2PPH5 198 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 C15orf61A6NNL5 157 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 C22orf46C9J442 243 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 LY86O95711 162 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 IGHV2-5P01817 119 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 SLC25A48Q6ZT89 311 aaKnown RBP11.8□□□□□ -0.52
COL5A1-205ENST00000464187 C11orf42Q8N5U0 333 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 ISOC2Q96AB3 205 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 ADTRPQ96IZ2 230 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 ZNRD1Q9P1U0 126 aa11.8□□□□□ -0.52
COL5A1-205ENST00000464187 PTPN13Q12923 2485 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 CENPEQ02224 2701 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 FOLR2P14207 255 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 PAX1P15863 534 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 FFAR4Q5NUL3 377 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 OR4A47Q6IF82 309 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 CLEC2AQ6UVW9 174 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 ZNF429Q86V71 674 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 RAB39BQ96DA2 213 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 PIMREGQ9BSJ6 248 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 SLC25A22Q9H936 323 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 TCF19Q9Y242 345 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 NBPF19A0A087WUL8 3843 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 NDUFS8O00217 210 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 FAM90A2PQ658T7 463 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 Q8N7P7 452 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 LY6G5BQ8NDX9 201 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 C10orf105Q8TEF2 133 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 RHOVQ96L33 236 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 HEYLQ9NQ87 328 aaPredicted RBP11.79□□□□□ -0.52
COL5A1-205ENST00000464187 SLC39A9Q9NUM3 307 aa11.79□□□□□ -0.52
COL5A1-205ENST00000464187 LOC105371242A0A075B767 164 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 CTXND1A0A1B0GTU2 59 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 PRSS46E5RG02 174 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 RRHO14718 337 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 IFNA10P01566 189 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 MBP02144 154 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 LIPFP07098 398 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 IGHV1-8P0DP01 117 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 HOXA1P49639 335 aaPredicted RBP11.78□□□□□ -0.52
COL5A1-205ENST00000464187 RPP30P78346 268 aaKnown RBP11.78□□□□□ -0.52
COL5A1-205ENST00000464187 POU2AF1Q16633 256 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 HIST2H2BCQ6DN03 193 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 OR10G9Q8NGN4 311 aa11.78□□□□□ -0.52
COL5A1-205ENST00000464187 OR10G7Q8NGN6 311 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms