RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 HIST1H2BAQ96A08 127 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 OR10C1Q96KK4 312 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 SGK494Q96LW2 274 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 CCL19Q99731 98 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 CCDC32Q9BV29 185 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 PRO1933Q9H354 126 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 METTL17Q9H7H0 456 aaPredicted RBP4.05□□□□□ -1.76
SF3A3-202ENST00000460925 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.05□□□□□ -1.76
SF3A3-202ENST00000460925 CBLN4Q9NTU7 201 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 ZNF581Q9P0T4 197 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 GPR132Q9UNW8 380 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 FOXJ3Q9UPW0 622 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 FOXA2Q9Y261 457 aaPredicted RBP4.05□□□□□ -1.76
SF3A3-202ENST00000460925 UFC1Q9Y3C8 167 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 DOCK11Q5JSL3 2073 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 CR1P17927 2039 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 BAHCC1Q9P281 2608 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 ABCA12Q86UK0 2595 aa4.05□□□□□ -1.76
SF3A3-202ENST00000460925 SVEP1Q4LDE5 3571 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 KIAA2026Q5HYC2 2103 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 APCP25054 2843 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 ABCA2Q9BZC7 2435 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DSCAML1Q8TD84 2053 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 ANKRD17O75179 2603 aaKnown RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 IGHV3OR15-7A0A075B7D8 119 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 IGKV1-12A0A0C4DH73 117 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 A0A1B0GW55 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 C1orf196B1AJZ1 125 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 F6UZH7 168 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 F8VVB4 439 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 F8VWA3 439 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 TRAPPC2LH3BP13 241 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 GPR31O00270 319 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 VENTXO95231 258 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 IGKV1D-12P01611 117 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 CD2P06729 351 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 WNT2P09544 360 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 CSF3P09919 207 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L2P0CJ85 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L3P0CJ86 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L4P0CJ87 422 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L5P0CJ88 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L6P0CJ89 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L7P0CJ90 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 RCC1P18754 421 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 MYL9P24844 172 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 PSMA1P25786 263 aaKnown RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 HTR2CP28335 458 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 RAB5CP51148 216 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 UBE2KP61086 200 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 SNRPD2P62316 118 aaKnown RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 TAF9Q16594 264 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 CEACAM21Q3KPI0 293 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 OR10K2Q6IF99 312 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4L9Q6RFH8 374 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 PAMR1Q6UXH9 720 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 UNQ6126/PRO20091Q6UXV3 157 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 SSX8Q7RTT4 187 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 SLC36A1Q7Z2H8 476 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 LAX1Q8IWV1 398 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 MUC20Q8N307 709 aaPredicted RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 FGFRL1Q8N441 504 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 JAGN1Q8N5M9 183 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 MS4A15Q8N5U1 240 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 OR8S1Q8NH09 359 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 TERB2Q8NHR7 220 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 RXFP4Q8TDU9 374 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 TMED6Q8WW62 240 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 OR5P3Q8WZ94 311 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 BORCS8Q96FH0 119 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 BARHL1Q9BZE3 327 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 C20orf85Q9H1P6 137 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 WDR13Q9H1Z4 485 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 TMEM100Q9NV29 134 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 DUX4Q9UBX2 424 aa4.04□□□□□ -1.76
SF3A3-202ENST00000460925 ANK3Q12955 4377 aaKnown RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 PRRC2AP48634 2157 aaKnown RBP4.04□□□□□ -1.76
SF3A3-202ENST00000460925 MED13LQ71F56 2210 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 CENPEQ02224 2701 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 MEIKINA0A087WXM9 373 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 IGHV2-70DA0A0C4DH43 119 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 DHRS7CA6NNS2 312 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 ARPC1BO15143 372 aaKnown RBP4.03□□□□□ -1.76
SF3A3-202ENST00000460925 SSNA1O43805 119 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 IGHV4-39P01824 125 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 AMBPP02760 352 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 GAPDHP04406 335 aaKnown RBP4.03□□□□□ -1.76
SF3A3-202ENST00000460925 SFTPBP07988 381 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 BCL3P20749 454 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 COL8A2P25067 703 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 FGF9P31371 208 aaPredicted RBP4.03□□□□□ -1.76
SF3A3-202ENST00000460925 PRDX2P32119 198 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 BRS3P32247 399 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 EFNB2P52799 333 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 MTCP1P56278 107 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 RIPPLY3P57055 190 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 EXOSC2Q13868 293 aaKnown RBP4.03□□□□□ -1.76
SF3A3-202ENST00000460925 KIAA0141Q14154 515 aaPredicted RBP4.03□□□□□ -1.76
SF3A3-202ENST00000460925 RSU1Q15404 277 aa4.03□□□□□ -1.76
SF3A3-202ENST00000460925 KISS1Q15726 138 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms