RNA–Protein interactions for RNA: ENST00000451859.5

RFX3-209, Transcript of regulatory factor X3, human

TSL 3

Gene RFX3, Length 740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RFX3-209	ENST00000451859	TTC9C	Q8N5M4	171 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	DMBX1	Q8NFW5	382 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	OR5AP2	Q8NGF4	316 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	TMEM167A	Q8TBQ9	72 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	COMMD3	Q9UBI1	195 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	FBXL7	Q9UJT9	491 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF257	Q9Y2Q1	563 aa		6.61	□□□□□ -1.35
RFX3-209	ENST00000451859	RBM14-RBM4	A0A0A0MSL8	147 aa	Known RBP	6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	TRBV9	A0A0B4J1U6	114 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	TRAV3	A0A0B4J244	114 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859		A0A1B0GW64	132 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	IZUMO1R	A6ND01	250 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	S1PR2	O95136	353 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	NDUFB8	O95169	186 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	BRI3	O95415	125 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	RLN1	P04808	185 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	EIF4E	P06730	217 aa	Known RBP	6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	CSN3	P07498	182 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	IGHV4-30-4	P0DP06	118 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	DEFA4	P12838	97 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	HLA-G	P17693	338 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	RFX2	P48378	723 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	VBP1	P61758	197 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	RPL8	P62917	257 aa	Known RBP	6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF124	Q15973	351 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	RNASE12	Q5GAN4	147 aa	Known RBP	6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	CLEC19A	Q6UXS0	136 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	IL34	Q6ZMJ4	242 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	SGPP2	Q8IWX5	399 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	NECAP1	Q8NC96	275 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	OR5H2	Q8NGV7	314 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	DYNLRB2	Q8TF09	96 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF2	Q9BSG1	426 aa	Predicted RBP	6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	FUNDC2	Q9BWH2	189 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	ZC4H2	Q9NQZ6	224 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	PEMT	Q9UBM1	199 aa		6.6	□□□□□ -1.35
RFX3-209	ENST00000451859	DBX1	A6NMT0	343 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859		H0Y980	276 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	OR2C1	O95371	312 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF735	P0CB33	412 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	HLA-DMA	P28067	261 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	PSMB6	P28072	239 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	PRSS3	P35030	304 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	MAS1L	P35410	378 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	TAS2R46	P59540	309 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	LCN12	Q6JVE5	192 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	GTSCR1	Q86UQ5	136 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	SNX29P2	Q8IUI4	249 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859		Q8N1Y9	231 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	ZBTB34	Q8NCN2	500 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	CACNG8	Q8WXS5	425 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	HINT2	Q9BX68	163 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	FXYD6	Q9H0Q3	95 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	ZMAT4	Q9H898	229 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	SLC2A9	Q9NRM0	540 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	TMEM140	Q9NV12	185 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	BET1L	Q9NYM9	111 aa		6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	6.59	□□□□□ -1.35
RFX3-209	ENST00000451859	ZNF320	A2RRD8	509 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	CGB1	A6NKQ9	187 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	NPIPB5	A8MRT5	1133 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	UPK2	O00526	184 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	HPGDS	O60760	199 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	DHFR	P00374	187 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	HPRT1	P00492	218 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	NQO2	P16083	231 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	GNRHR	P30968	328 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	HRH1	P35367	487 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	ARL3	P36405	182 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	TAS2R31	P59538	309 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	CD81	P60033	236 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	ERVK-16	P61578	105 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	MSMO1	Q15800	293 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	GUCA2B	Q16661	112 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	CD300E	Q496F6	205 aa	Predicted RBP	6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	PHLDA2	Q53GA4	152 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859		Q8N402	240 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	OR10W1	Q8NGF6	305 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	OR4A5	Q8NH83	315 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	GIMAP1	Q8WWP7	306 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	SLC25A46	Q96AG3	418 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	MOB3A	Q96BX8	217 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	CCDC140	Q96MF4	163 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	FANCD2OS	Q96PS1	177 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	AIFM2	Q9BRQ8	373 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	COMMD5	Q9GZQ3	224 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	TUBA4B	Q9H853	241 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	PLEKHA3	Q9HB20	300 aa		6.58	□□□□□ -1.36
RFX3-209	ENST00000451859	IGHV3-35	A0A0C4DH35	117 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	SMIM31	A0A1B0GVY4	71 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	IGLC7	A0M8Q6	106 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	MFSD2B	A6NFX1	497 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	C2orf70	A6NJV1	201 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	MARCH11	A6NNE9	402 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM25A	B3EWG3	89 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM25C	B3EWG5	89 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	FAM25G	B3EWG6	89 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	RBFOX2	O43251	390 aa	Known RBP eCLIP	6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	TMEM127	O75204	238 aa		6.57	□□□□□ -1.36
RFX3-209	ENST00000451859	GGCT	O75223	188 aa	Known RBP	6.57	□□□□□ -1.36

Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms