RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 GRPEL2Q8TAA5 225 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 FAM103A1Q9BTL3 118 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 QTRT1Q9BXR0 403 aaKnown RBP14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 PARP11Q9NR21 331 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 LINC00527Q9UJ94 153 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 FBXO7Q9Y3I1 522 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 TMED3Q9Y3Q3 217 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 OR51B2Q9Y5P1 312 aa14.21□□□□□ -0.13
TRAPPC4-203ENST00000447216 E7EUB6 86 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 ATP6V0E1O15342 81 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 ACTL6BO94805 426 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 NXPH3O95157 252 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 IFNA21P01568 189 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 IGHG2P01859 326 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 SULT1A3P0DMM9 295 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 SULT1A4P0DMN0 295 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 ZNF562Q6V9R5 426 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 ARPC1AQ92747 370 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 PRNDQ9UKY0 176 aa14.2□□□□□ -0.14
TRAPPC4-203ENST00000447216 PIGBOS1A0A0B4J2F0 54 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 TEX50A0A1B0GTY4 177 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 C13orf42A0A1B0GVH6 325 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 A0A1B0GW64 132 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 FAM25EA8MYX2 175 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 GOSR2O14653 212 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 TSPAN9O75954 239 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 SIX6O95475 246 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 APELAP0DMC3 54 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 EGR2P11161 476 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 MAS1LP35410 378 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 RPL27AP46776 148 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 COMPP49747 757 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 SMCO1Q147U7 214 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 FOXRED2Q8IWF2 684 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 Q8N2B8 174 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 SRSF12Q8WXF0 261 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR10C1Q96KK4 312 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 NOL4LQ96MY1 436 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 FYTTD1Q96QD9 318 aaKnown RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 TMEM14BQ9NUH8 114 aa14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 FOXA2Q9Y261 457 aaPredicted RBP14.19□□□□□ -0.14
TRAPPC4-203ENST00000447216 CGB1A6NKQ9 187 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 ST8SIA3O43173 380 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 KCNAB3O43448 404 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 VDAC2P45880 294 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 SPINK9Q5DT21 86 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 THOC7Q6I9Y2 204 aaKnown RBP14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR1S1Q8NH92 325 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 HINT2Q9BX68 163 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 COMMD5Q9GZQ3 224 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 WSB1Q9Y6I7 421 aa14.18□□□□□ -0.14
TRAPPC4-203ENST00000447216 A0A1B0GU03 582 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 C5orf51A6NDU8 294 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 HMX3A6NHT5 357 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 MSGN1A6NI15 193 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 NDUFA7O95182 113 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 IAH1Q2TAA2 248 aaPredicted RBP14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 Q6ZNX1 250 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR1L8Q8NGR8 309 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR2T6Q8NHC8 308 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 MGAT4CQ9UBM8 478 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 ATRQ13535 2644 aa14.17□□□□□ -0.14
TRAPPC4-203ENST00000447216 TEX22C9J3V5 150 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 G3V318 75 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 HKR1P10072 659 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 ECSCRQ19T08 205 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 KRTAP24-1Q3LI83 254 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR10W1Q8NGF6 305 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 SPIN2AQ99865 258 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 SPIN2BQ9BPZ2 258 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 MED28Q9H204 178 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 C16orf95Q9H693 158 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 SERTAD4Q9NUC0 356 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 FKBP11Q9NYL4 201 aa14.16□□□□□ -0.14
TRAPPC4-203ENST00000447216 AP4M1O00189 453 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 PITX3O75364 302 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 IFNA17P01571 189 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 FGF2P09038 288 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 TRAPPC2P0DI81 140 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 TRAPPC2BP0DI82 140 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 SLC25A6P12236 298 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 MDKP21741 143 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 HSPE1P61604 102 aaKnown RBP14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 FCN2Q15485 313 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 CXorf66Q5JRM2 361 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 C11orf87Q6NUJ2 197 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 GSG1LQ6UXU4 331 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 ZNF429Q86V71 674 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 ZBTB8BQ8NAP8 495 aaPredicted RBP14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 LFNGQ8NES3 379 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR5M8Q8NGP6 311 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 OR4F5Q8NH21 305 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 SGMS2Q8NHU3 365 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 LINC01006Q8NI28 216 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 NDUFA4L2Q9NRX3 87 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 COA4Q9NYJ1 87 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 GSKIPQ9P0R6 139 aa14.15□□□□□ -0.14
TRAPPC4-203ENST00000447216 IGF1P05019 195 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms