RNA–Protein interactions for RNA: ENST00000443203.5

NELFA-208, Transcript of negative elongation factor complex member A, human

TSL 4

Gene NELFA, Length 553 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NELFA-208	ENST00000443203	VDAC1	P21796	283 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	DEFA6	Q01524	100 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	LRTM2	Q8N967	370 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	LINC01006	Q8NI28	216 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	LHFPL5	Q8TAF8	219 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	ZNF431	Q8TF32	576 aa	Predicted RBP	11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	ARPC1A	Q92747	370 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	TAF15	Q92804	592 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	HSPB9	Q9BQS6	159 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	PARP11	Q9NR21	331 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	PRR13	Q9NZ81	148 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	PRND	Q9UKY0	176 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	RNF114	Q9Y508	228 aa		11.14	□□□□□ -0.63
NELFA-208	ENST00000443203	IGKV1-5	P01602	117 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	FGF2	P09038	288 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	OR9G9	P0C7N8	305 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	PJVK	Q0ZLH3	352 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	ANKRD55	Q3KP44	614 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	SLC35G3	Q8N808	338 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	CHPT1	Q8WUD6	406 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	MITD1	Q8WV92	249 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	TMEM68	Q96MH6	324 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	PDCD10	Q9BUL8	212 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	TMED3	Q9Y3Q3	217 aa		11.13	□□□□□ -0.63
NELFA-208	ENST00000443203	TRAV3	A0A0B4J244	114 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	LINC01548	A6NM66	108 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	ATP6V0E1	O15342	81 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	IFNA21	P01568	189 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	IGF1	P05019	195 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SPN	P16150	400 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	MDK	P21741	143 aa	Predicted RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	RPL27A	P46776	148 aa	Known RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SLC35B1	P78383	322 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	LYZL2	Q7Z4W2	148 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	STPG2	Q8N412	459 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	C12orf45	Q8N5I9	185 aa	Predicted RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	OR52B4	Q8NGK2	314 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	GRPEL2	Q8TAA5	225 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SRSF12	Q8WXF0	261 aa	Known RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	GPR146	Q96CH1	333 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	FYTTD1	Q96QD9	318 aa	Known RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SPIN2A	Q99865	258 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SPIN2B	Q9BPZ2	258 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SEC22C	Q9BRL7	303 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	SERTAD4	Q9NUC0	356 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	CACFD1	Q9UGQ2	172 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	ZNF580	Q9UK33	172 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	NSG2	Q9Y328	171 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	OR51B2	Q9Y5P1	312 aa		11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	PRKDC	P78527	4128 aa	Known RBP	11.12	□□□□□ -0.63
NELFA-208	ENST00000443203	MSGN1	A6NI15	193 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	C15orf61	A6NNL5	157 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	SNRPGP15	A8MWD9	76 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	HOXB5	P09067	269 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	ECSCR	Q19T08	205 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	MRGPRG-AS1	Q2M3A8	158 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	TMEM95	Q3KNT9	176 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	THOC7	Q6I9Y2	204 aa	Known RBP	11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	MINDY2	Q8NBR6	621 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	UXS1	Q8NBZ7	420 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	OR1L8	Q8NGR8	309 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	FAM103A1	Q9BTL3	118 aa	Known RBP	11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	LINC00527	Q9UJ94	153 aa		11.11	□□□□□ -0.63
NELFA-208	ENST00000443203	TRAV41	A0A0B4J266	112 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	TEX50	A0A1B0GTY4	177 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	PSMB11	A5LHX3	300 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	OPN1MW	P04001	364 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203		P0C879	139 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	TRAPPC2	P0DI81	140 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	TRAPPC2B	P0DI82	140 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	SULT1A3	P0DMM9	295 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	SULT1A4	P0DMN0	295 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	OPN1MW2	P0DN77	364 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	OPN1MW3	P0DN78	364 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	OR2B8P	P59922	312 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	HSPE1	P61604	102 aa	Known RBP	11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	NDP	Q00604	133 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	AKIRIN2	Q53H80	203 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	UNQ5815/PRO19632	Q6UWF5	114 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	ZNF429	Q86V71	674 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	MRPL41	Q8IXM3	137 aa	Known RBP	11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	LFNG	Q8NES3	379 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	OR5B3	Q8NH48	314 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	NOL4L	Q96MY1	436 aa	Predicted RBP	11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	CACNG5	Q9UF02	275 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	FOXA2	Q9Y261	457 aa	Predicted RBP	11.1	□□□□□ -0.63
NELFA-208	ENST00000443203	WSB1	Q9Y6I7	421 aa		11.1	□□□□□ -0.63
NELFA-208	ENST00000443203		A0A0B4J293	547 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203		A0A0G2JRQ6	117 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203		A0A1B0GU03	582 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	IFNA17	P01571	189 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	SLC25A6	P12236	298 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	CRIP2	P52943	208 aa	Predicted RBP	11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	SSBP2	P81877	361 aa	Predicted RBP	11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	SMCO1	Q147U7	214 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	OXA1L	Q15070	435 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	IZUMO4	Q1ZYL8	232 aa		11.09	□□□□□ -0.63
NELFA-208	ENST00000443203	NMS	Q5H8A3	153 aa		11.09	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms