RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 TMEM140Q9NV12 185 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 STAB2Q8WWQ8 2551 aa15.16■□□□□ 0.02
SHROOM1-204ENST00000440118 PPP5D1E7EU14 171 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 BMPR1BO00238 502 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 S1PR2O95136 353 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 APOA1P02647 267 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 REG1AP05451 166 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 MYOD1P15172 320 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 RPA2P15927 270 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 HIST1H1BP16401 226 aaKnown RBP15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 PSMB6P28072 239 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 HRH1P35367 487 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 TSPAN5P62079 268 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 CNPY1Q3B7I2 92 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 AP3S1Q92572 193 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 PLEKHA2Q9HB19 425 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 COMMD9Q9P000 198 aa15.15■□□□□ 0.02
SHROOM1-204ENST00000440118 FAM25AB3EWG3 89 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 FAM25CB3EWG5 89 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 FAM25GB3EWG6 89 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 E7EUB6 86 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 IGHV3-23P01764 117 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 GNRHRP30968 328 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 RORCP51449 518 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 CLVS1Q8IUQ0 354 aaPredicted RBP15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 EEF1AKMT3Q96AZ1 226 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 ZMAT4Q9H898 229 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 ANAPC10Q9UM13 185 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 CEPT1Q9Y6K0 416 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 S4R3C0 116 aa15.14■□□□□ 0.01
SHROOM1-204ENST00000440118 GPR31O00270 319 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 CYB5BO43169 146 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 HPGDSO60760 199 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 GGCTO75223 188 aaKnown RBP15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 CSN3P07498 182 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 MZT2AQ6P582 158 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 DHRS11Q6UWP2 260 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 SBSPONQ8IVN8 264 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 Q8N402 240 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 CMTM3Q96MX0 182 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 FXYD6Q9H0Q3 95 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 SCPEP1Q9HB40 452 aa15.13■□□□□ 0.01
SHROOM1-204ENST00000440118 A0A1B0GW64 132 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 MARCH11A6NNE9 402 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 UPK2O00526 184 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 CRYGCP07315 174 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 IGHV4-30-4P0DP06 118 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 NAT1P18440 290 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 F2RP25116 425 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 RCVRNP35243 200 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 ARL3P36405 182 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 OR2B8PP59922 312 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 POU2AF1Q16633 256 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 CLEC19AQ6UXS0 136 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 IL34Q6ZMJ4 242 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 RCHY1Q96PM5 261 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 HINT2Q9BX68 163 aa15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 QTRT1Q9BXR0 403 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 RBM38Q9H0Z9 239 aaKnown RBP15.12■□□□□ 0.01
SHROOM1-204ENST00000440118 TRAV3A0A0B4J244 114 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 PGLYRP1O75594 196 aaPredicted RBP15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 NDUFB8O95169 186 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 HLA-AP01891 365 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 CTRB1P17538 263 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 PHLDA2Q53GA4 152 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 RNASE12Q5GAN4 147 aaKnown RBP15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 CTRB2Q6GPI1 263 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 GPX8Q8TED1 209 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 CXorf58Q96LI9 332 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 SIGLEC8Q9NYZ4 499 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 THYN1Q9P016 225 aa15.11■□□□□ 0.01
SHROOM1-204ENST00000440118 SNAPC5O75971 98 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 ELK1P19419 428 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 LPAR6P43657 344 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 THOC7Q6I9Y2 204 aaKnown RBP15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 LPCAT3Q6P1A2 487 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 FANCD2OSQ96PS1 177 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 TUBA4BQ9H853 241 aa15.1■□□□□ 0.01
SHROOM1-204ENST00000440118 ZNF320A2RRD8 509 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 OR2C1O95371 312 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 KRASP01116 189 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 GPR107Q5VW38 600 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 OR2K2Q8NGT1 345 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 FCAMRQ8WWV6 532 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 CCDC140Q96MF4 163 aa15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 SRSF8Q9BRL6 282 aaKnown RBP15.09■□□□□ 0.01
SHROOM1-204ENST00000440118 IGLV11-55A0A075B6I3 123 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 TRBV7-1A0A0A6YYK4 115 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 IGLC7A0M8Q6 106 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 GABARAPO95166 117 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 IFNA6P05013 189 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 TRAPPC2P0DI81 140 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 TRAPPC2BP0DI82 140 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 G6PCP35575 357 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 MECP2P51608 486 aaKnown RBP15.08■□□□□ 0
SHROOM1-204ENST00000440118 FAM106AQ4KMX7 169 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 HSD17B13Q7Z5P4 300 aaPredicted RBP15.08■□□□□ 0
SHROOM1-204ENST00000440118 LYSMD2Q8IV50 215 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 OR1L8Q8NGR8 309 aa15.08■□□□□ 0
SHROOM1-204ENST00000440118 ISOC1Q96CN7 298 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms