RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 A0A1B0GU03 582 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 SULT1A3P0DMM9 295 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 SULT1A4P0DMN0 295 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 VDAC2P45880 294 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-208ENST00000438518 TMEM267Q0VDI3 215 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-208ENST00000438518 FOXL1Q12952 345 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 AARDQ4LEZ3 155 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 HSD17B13Q7Z5P4 300 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-208ENST00000438518 SGMS2Q8NHU3 365 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 SRSF12Q8WXF0 261 aaKnown RBP14.54□□□□□ -0.08
HDAC6-208ENST00000438518 PDCD10Q9BUL8 212 aa14.54□□□□□ -0.08
HDAC6-208ENST00000438518 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.54□□□□□ -0.08
HDAC6-208ENST00000438518 RBMXL2O75526 392 aaKnown RBP14.53□□□□□ -0.08
HDAC6-208ENST00000438518 RPL27AP46776 148 aaKnown RBP14.53□□□□□ -0.08
HDAC6-208ENST00000438518 SSBP2P81877 361 aaPredicted RBP14.53□□□□□ -0.08
HDAC6-208ENST00000438518 PJVKQ0ZLH3 352 aa14.53□□□□□ -0.08
HDAC6-208ENST00000438518 SMCO1Q147U7 214 aa14.53□□□□□ -0.08
HDAC6-208ENST00000438518 MRPL41Q8IXM3 137 aaKnown RBP14.53□□□□□ -0.08
HDAC6-208ENST00000438518 OR52E5Q8NH55 327 aa14.53□□□□□ -0.08
HDAC6-208ENST00000438518 GPR146Q96CH1 333 aa14.53□□□□□ -0.08
HDAC6-208ENST00000438518 A0A0G2JRQ6 117 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 TMEM89A2RUT3 159 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 SH2D7A6NKC9 451 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-208ENST00000438518 ATP6V0E1O15342 81 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 HOXB5P09067 269 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 GNB1P62873 340 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 AKIRIN2Q53H80 203 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 GGNBP1Q5YKI7 109 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 Q6ZS46 218 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP14.52□□□□□ -0.09
HDAC6-208ENST00000438518 OR1L8Q8NGR8 309 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 LINC01006Q8NI28 216 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 TMEM158Q8WZ71 300 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 QTRT1Q9BXR0 403 aaKnown RBP14.52□□□□□ -0.09
HDAC6-208ENST00000438518 PARP11Q9NR21 331 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 SERTAD4Q9NUC0 356 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 CACNG5Q9UF02 275 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 OR51B2Q9Y5P1 312 aa14.52□□□□□ -0.09
HDAC6-208ENST00000438518 TRAV3A0A0B4J244 114 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 A0A0B4J293 547 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 CLPSL1A2RUU4 121 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 HSPE1P61604 102 aaKnown RBP14.51□□□□□ -0.09
HDAC6-208ENST00000438518 NDPQ00604 133 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 PDLIM3Q53GG5 364 aaPredicted RBP14.51□□□□□ -0.09
HDAC6-208ENST00000438518 STPG2Q8N412 459 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 ABHD5Q8WTS1 349 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 NF1P21359 2839 aa14.51□□□□□ -0.09
HDAC6-208ENST00000438518 A0A1W2PN81 502 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 FAM90A26D6RGX4 464 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 ADAP1O75689 374 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 CHRNA7P36544 502 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 OR2B8PP59922 312 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 SLC35B1P78383 322 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 SRSF2Q01130 221 aaKnown RBP14.5□□□□□ -0.09
HDAC6-208ENST00000438518 KRTAP24-1Q3LI83 254 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 UXS1Q8NBZ7 420 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 GRPEL2Q8TAA5 225 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 WNT10AQ9GZT5 417 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 NDUFA4L2Q9NRX3 87 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 NSG2Q9Y328 171 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 ALG5Q9Y673 324 aa14.5□□□□□ -0.09
HDAC6-208ENST00000438518 TRAV41A0A0B4J266 112 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 TEX50A0A1B0GTY4 177 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 INS-IGF2F8WCM5 200 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 SSNA1O43805 119 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 PITX3O75364 302 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 TRAPPC2P0DI81 140 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 TRAPPC2BP0DI82 140 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 SPCS3P61009 180 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 PRCDQ00LT1 54 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 Q6ZRM9 215 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 COMMD1Q8N668 190 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 OR5M8Q8NGP6 311 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 OR1S1Q8NH92 325 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 RNF114Q9Y508 228 aa14.49□□□□□ -0.09
HDAC6-208ENST00000438518 MSGN1A6NI15 193 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 ST8SIA3O43173 380 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 LY86O95711 162 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 IFNA17P01571 189 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 EGR2P11161 476 aaPredicted RBP14.48□□□□□ -0.09
HDAC6-208ENST00000438518 IZUMO4Q1ZYL8 232 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 C10orf55Q5SWW7 151 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 GSG1LQ6UXU4 331 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 FBXO7Q9Y3I1 522 aa14.48□□□□□ -0.09
HDAC6-208ENST00000438518 LINC01548A6NM66 108 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 TEX22C9J3V5 150 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 MDKP21741 143 aaPredicted RBP14.47□□□□□ -0.09
HDAC6-208ENST00000438518 PROK1P58294 105 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 ECSCRQ19T08 205 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 C19orf54Q5BKX5 351 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 UNQ5815/PRO19632Q6UWF5 114 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 LFNGQ8NES3 379 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 FYTTD1Q96QD9 318 aaKnown RBP14.47□□□□□ -0.09
HDAC6-208ENST00000438518 FAM103A1Q9BTL3 118 aaKnown RBP14.47□□□□□ -0.09
HDAC6-208ENST00000438518 C19orf24Q9BVV8 132 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 PLEKHA3Q9HB20 300 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 HSPB7Q9UBY9 170 aa14.47□□□□□ -0.09
HDAC6-208ENST00000438518 TET2Q6N021 2002 aaPredicted RBP14.46□□□□□ -0.09
HDAC6-208ENST00000438518 PSMB11A5LHX3 300 aa14.46□□□□□ -0.09
HDAC6-208ENST00000438518 CGB1A6NKQ9 187 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms