RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 MPDZO75970 2070 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 RGPD8O14715 1765 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 TEX50A0A1B0GTY4 177 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 SLC16A4O15374 487 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 IL6P05231 212 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ESDP10768 282 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 SLC25A16P16260 332 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 PPP1R1AQ13522 171 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ACSBG2Q5FVE4 666 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 PTRHD1Q6GMV3 140 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF322Q6U7Q0 402 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 CCDC121Q6ZUS5 278 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 OR11H1Q8NG94 326 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 OR4K13Q8NH42 304 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 TMBIM1Q969X1 311 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 C20orf166-AS1Q96NR2 134 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 C1QTNF6Q9BXI9 259 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 CDCA4Q9BXL8 241 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 TUBA4BQ9H853 241 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 POLR3HQ9Y535 204 aaPredicted RBP1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 NBEAQ8NFP9 2946 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF609O15014 1411 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 SMG6Q86US8 1419 aaKnown RBP1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ITPR1Q14643 2758 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 ADGRB1O14514 1584 aa1.62□□□□□ -2.15
TRAPPC13-204ENST00000438419 C4BP0C0L5 1744 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 TRAV8-1A0A0A6YYK1 113 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF878C9JN71 531 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 CXCR6O00574 342 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 IGLV3-27P01718 113 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 KRT7P08729 469 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 C8orf88P0DMB2 117 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 IGHV3-30-3P0DP02 117 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 ATP6V0CP27449 155 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 LPAR6P43657 344 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 DAPP51397 102 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 RWDD2BP57060 319 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF117Q03924 483 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 FOXF1Q12946 379 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 KRTAP6-3Q3LI67 103 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 RASL11AQ6T310 242 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 Q8WTZ3 238 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 TBX5Q99593 518 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 MAP1LC3AQ9H492 121 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 SNX12Q9UMY4 172 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 HEY1Q9Y5J3 304 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 PTPRJQ12913 1337 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 NSD3Q9BZ95 1437 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 ABCA2Q9BZC7 2435 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 COL1A1P02452 1464 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 SETD2Q9BYW2 2564 aaPredicted RBP1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 IGSF10Q6WRI0 2623 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 E9PCH4 1651 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 TJP1Q07157 1748 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 PLXNA3P51805 1871 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 UBR3Q6ZT12 1888 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 ALPK3Q96L96 1907 aa1.61□□□□□ -2.15
TRAPPC13-204ENST00000438419 MYO15AQ9UKN7 3530 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 SMG1Q96Q15 3661 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 C19orf71A6NCJ1 209 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 LRRN3E7EW58 273 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 GSTZ1O43708 216 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 LY6HO94772 140 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 CD7P09564 240 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 CD36P16671 472 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 OPRM1P35372 400 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 CA7P43166 264 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 TSPEAR-AS2P59090 65 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 CXCR4P61073 352 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 FGF12P61328 243 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 UBE2IP63279 158 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 GNA13Q14344 377 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 OGFRL1Q5TC84 451 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 TNFAIP8L2Q6P589 184 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 TCF24Q7RTU0 167 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 NAA40Q86UY6 237 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 ZNF567Q8N184 647 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 PIGXQ8TBF5 258 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 HAVCR2Q8TDQ0 301 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 EEF1AKMT1Q8WVE0 214 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 UPK3BQ9BT76 320 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 SMDT1Q9H4I9 107 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 MINOS1-NBL1R4GNA1 71 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 CCNB3Q8WWL7 1395 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 ABCC11Q96J66 1382 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 PPIP5K1Q6PFW1 1433 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 LRRC37A2A6NM11 1700 aa1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 EP300Q09472 2414 aaPredicted RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 TLN1Q9Y490 2541 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 DSPP15924 2871 aaKnown RBP1.6□□□□□ -2.15
TRAPPC13-204ENST00000438419 IGF2RP11717 2491 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 SPG11Q96JI7 2443 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 TAF1LQ8IZX4 1826 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 ANKRD26Q9UPS8 1709 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 CPDO75976 1380 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 IGHV3-73A0A0B4J1V6 119 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 C5orf49A4QMS7 147 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 TRAPPC3O43617 180 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 HLA-DRAP01903 254 aa1.59□□□□□ -2.15
TRAPPC13-204ENST00000438419 RPS12P25398 132 aaKnown RBP1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms