RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 H3BQ15 152 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 MMP23AO75900 390 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 PLAUP00749 431 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 IL6RP08887 468 aaPredicted RBP10.5□□□□□ -0.73
DDX56-204ENST00000431640 SLC35E3Q7Z769 313 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 RPP25LQ8N5L8 163 aaKnown RBP10.5□□□□□ -0.73
DDX56-204ENST00000431640 LINC00311Q8N616 119 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 OSR1Q8TAX0 266 aaPredicted RBP10.5□□□□□ -0.73
DDX56-204ENST00000431640 ZNF596Q8TC21 504 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 NEUROG1Q92886 237 aa10.5□□□□□ -0.73
DDX56-204ENST00000431640 A0A087WWC5 75 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 TRAV3A0A0B4J244 114 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 A0A1W2PPR1 153 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 ZFP92A6NM28 416 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 UPK2O00526 184 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 APOA2P02652 100 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 CTRB1P17538 263 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 UTF1Q5T230 341 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 CTRB2Q6GPI1 263 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 ACSM6Q6P461 480 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 OR13D1Q8NGV5 346 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 H1FXQ92522 213 aaKnown RBP10.49□□□□□ -0.73
DDX56-204ENST00000431640 TMEM186Q96B77 213 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 NPVFQ9HCQ7 196 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 KCNIP2Q9NS61 270 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 OR51B2Q9Y5P1 312 aa10.49□□□□□ -0.73
DDX56-204ENST00000431640 TRBV23-1A0A0A0MS06 115 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 FNDC10F2Z333 226 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 DVL1O14640 695 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 IFNA4P05014 189 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 CRYBA1P05813 215 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 OPRK1P41145 380 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 PSMB3P49720 205 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 PNRC1Q12796 327 aaPredicted RBP10.48□□□□□ -0.73
DDX56-204ENST00000431640 TMEM249Q2WGJ8 235 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 CYB561D1Q8N8Q1 229 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 C20orf24Q9BUV8 137 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 MANBALQ9NQG1 85 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 BET1LQ9NYM9 111 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 LRRK2Q5S007 2527 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 CXorf65A6NEN9 183 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 J3QKU1 62 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 RRHO14718 337 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 KBTBD11O94819 623 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 CEBPGP53567 150 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 FGF8P55075 233 aaPredicted RBP10.48□□□□□ -0.73
DDX56-204ENST00000431640 RAB31Q13636 194 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 SMUG1Q53HV7 270 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 LYPD2Q6UXB3 125 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 ABHD12Q8N2K0 398 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 RAB1CQ92928 201 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 NEIL1Q96FI4 390 aaPredicted RBP10.48□□□□□ -0.73
DDX56-204ENST00000431640 SIRT7Q9NRC8 400 aa10.48□□□□□ -0.73
DDX56-204ENST00000431640 A0A087X0M5 115 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 A0A1B0GX30 115 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 A0A1W2PPH5 198 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 A1L4Q6 167 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 PRSS46E5RG02 174 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 J3QR06 171 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 IGKV1D-33P01593 117 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 IGKV1-33P01594 117 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 CCL3L1P16619 93 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 NPY1RP25929 384 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 MAS1LP35410 378 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 RAB5BP61020 215 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 RPS16P62249 146 aaKnown RBP10.47□□□□□ -0.73
DDX56-204ENST00000431640 TMEM177Q53S58 311 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 SSX7Q7RTT5 188 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 MUC15Q8N387 334 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 SLC24A4Q8NFF2 622 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 OR5AN1Q8NGI8 311 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 OR10X1Q8NGY0 326 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 OR5B3Q8NH48 314 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 OR4A5Q8NH83 315 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 OR9G1Q8NH87 305 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 PCGF1Q9BSM1 259 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 PRELID1Q9Y255 219 aa10.47□□□□□ -0.73
DDX56-204ENST00000431640 LRBAP50851 2863 aa10.46□□□□□ -0.73
DDX56-204ENST00000431640 SMCO3A2RU48 225 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 C1orf196B1AJZ1 125 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 SEC14L6B5MCN3 397 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 OR2C1O95371 312 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 FBP1P09467 338 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 IL3RAP26951 378 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 MC5RP33032 325 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 FBN2P35556 2912 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 AKR1C3P42330 323 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 CDC34P49427 236 aaPredicted RBP10.46□□□□□ -0.74
DDX56-204ENST00000431640 RAB13P51153 203 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 PRCDQ00LT1 54 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 ZNF672Q499Z4 452 aaPredicted RBP10.46□□□□□ -0.74
DDX56-204ENST00000431640 TMEM155Q4W5P6 130 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 TREML4Q6UXN2 200 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 VSTM2AQ8TAG5 236 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 TNFRSF14Q92956 283 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 RAB24Q969Q5 203 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 HIST1H2BAQ96A08 127 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 FLYWCH2Q96CP2 140 aaKnown RBP10.46□□□□□ -0.74
DDX56-204ENST00000431640 TMEM204Q9BSN7 226 aa10.46□□□□□ -0.74
DDX56-204ENST00000431640 PLEKHA3Q9HB20 300 aa10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms