RNA–Protein interactions for RNA: ENST00000430158.5

USP40-205, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 1,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-205ENST00000430158 KRASP01116 189 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 OR9G9P0C7N8 305 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 PSMB8P28062 276 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 MAS1LP35410 378 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 INPP1P49441 399 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 AKIRIN2Q53H80 203 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 ARSJQ5FYB0 599 aaPredicted RBP9.71□□□□□ -0.86
USP40-205ENST00000430158 C10orf55Q5SWW7 151 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 SLC25A42Q86VD7 318 aa9.71□□□□□ -0.86
USP40-205ENST00000430158 SELENOHQ8IZQ5 122 aaKnown RBP9.71□□□□□ -0.86
USP40-205ENST00000430158 A0A0G2JRQ6 117 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 MSGN1A6NI15 193 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 FBXO24O75426 580 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 SERPINE2P07093 398 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 HLA-GP17693 338 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 OR2B8PP59922 312 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 RPL8P62917 257 aaKnown RBP9.7□□□□□ -0.86
USP40-205ENST00000430158 FOXE3Q13461 319 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 TMEM128Q5BJH2 165 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 C11orf44Q8N8P7 122 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 LFNGQ8NES3 379 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 SRSF12Q8WXF0 261 aaKnown RBP9.7□□□□□ -0.86
USP40-205ENST00000430158 CITED2Q99967 270 aaPredicted RBP9.7□□□□□ -0.86
USP40-205ENST00000430158 KLK15Q9H2R5 256 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 NBEAL1Q6ZS30 2694 aa9.7□□□□□ -0.86
USP40-205ENST00000430158 A0A0B4J293 547 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 CENPXA8MT69 81 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 CNIH1O95406 144 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 BRI3O95415 125 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 ELANEP08246 267 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 AKR1C4P17516 323 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 GNB1P62873 340 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 PPP1R1AQ13522 171 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 TNXAQ16473 311 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 IZUMO4Q1ZYL8 232 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 KLK9Q2XQG4 91 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 AARDQ4LEZ3 155 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 TEX38Q6PEX7 206 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 Q6ZRM9 215 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 LCNL1Q6ZST4 164 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 TMED4Q7Z7H5 227 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 SGPP2Q8IWX5 399 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 COMMD1Q8N668 190 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 DMBX1Q8NFW5 382 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 GRPEL2Q8TAA5 225 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 GON7Q9BXV9 100 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 TMEM14BQ9NUH8 114 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 PRR13Q9NZ81 148 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 KLK9Q9UKQ9 250 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 NSG2Q9Y328 171 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
USP40-205ENST00000430158 TEX50A0A1B0GTY4 177 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 CREBL2O60519 120 aaPredicted RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 RBMXL2O75526 392 aaKnown RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 SFT2D2O95562 160 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 TCRBP04435 133 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 VDAC1P21796 283 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 RPL27AP46776 148 aaKnown RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 MECP2P51608 486 aaKnown RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 UBE2MP61081 183 aaKnown RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 ERVK-16P61578 105 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 ECSCRQ19T08 205 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 ANKRD55Q3KP44 614 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 UNQ5815/PRO19632Q6UWF5 114 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 CENPSQ8N2Z9 138 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 LRTM2Q8N967 370 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 RBPMSQ93062 196 aaKnown RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 IL22RA2Q969J5 263 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 TMEM68Q96MH6 324 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 ALX4Q9H161 411 aaPredicted RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 NDUFA4L2Q9NRX3 87 aa9.68□□□□□ -0.86
USP40-205ENST00000430158 FOXA2Q9Y261 457 aaPredicted RBP9.68□□□□□ -0.86
USP40-205ENST00000430158 IGLC7A0M8Q6 106 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 HMX3A6NHT5 357 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 C15orf61A6NNL5 157 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 RPLP1P05386 114 aaKnown RBP9.67□□□□□ -0.86
USP40-205ENST00000430158 CRYGCP07315 174 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 ANXA7P20073 488 aaKnown RBP9.67□□□□□ -0.86
USP40-205ENST00000430158 SLC35B1P78383 322 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 TMEM267Q0VDI3 215 aaPredicted RBP9.67□□□□□ -0.86
USP40-205ENST00000430158 TRIM16LQ309B1 348 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 NMSQ5H8A3 153 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 C18orf65Q6ZTR6 163 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 H2BFWTQ7Z2G1 175 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 NDUFA11Q86Y39 141 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 TTC9CQ8N5M4 171 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 OR5T1Q8NG75 326 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 FAM110DQ8TAY7 271 aaPredicted RBP9.67□□□□□ -0.86
USP40-205ENST00000430158 GPR146Q96CH1 333 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 KCNIP3Q9Y2W7 256 aa9.67□□□□□ -0.86
USP40-205ENST00000430158 TCRBV4S1A1TA0A5B7 111 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 C9orf170A2RU37 121 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 OPN1MWP04001 364 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 OPN1MW2P0DN77 364 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 OPN1MW3P0DN78 364 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 AREGP15514 252 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 RAB9AP51151 201 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 RPL23AP62750 156 aaKnown RBP9.66□□□□□ -0.86
USP40-205ENST00000430158 TMEM268Q5VZI3 342 aa9.66□□□□□ -0.86
USP40-205ENST00000430158 ZNF429Q86V71 674 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms