RNA–Protein interactions for RNA: ENST00000410044.5

LSM5-207, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-207ENST00000410044 PITX3O75364 302 aa12□□□□□ -0.49
LSM5-207ENST00000410044 ACTL6BO94805 426 aa12□□□□□ -0.49
LSM5-207ENST00000410044 IFNA21P01568 189 aa12□□□□□ -0.49
LSM5-207ENST00000410044 HOXB5P09067 269 aa12□□□□□ -0.49
LSM5-207ENST00000410044 SULT1A3P0DMM9 295 aa12□□□□□ -0.49
LSM5-207ENST00000410044 SULT1A4P0DMN0 295 aa12□□□□□ -0.49
LSM5-207ENST00000410044 HSPE1P61604 102 aaKnown RBP12□□□□□ -0.49
LSM5-207ENST00000410044 TNXAQ16473 311 aa12□□□□□ -0.49
LSM5-207ENST00000410044 PDLIM3Q53GG5 364 aaPredicted RBP12□□□□□ -0.49
LSM5-207ENST00000410044 OR1L8Q8NGR8 309 aa12□□□□□ -0.49
LSM5-207ENST00000410044 OR4F5Q8NH21 305 aa12□□□□□ -0.49
LSM5-207ENST00000410044 OR5B3Q8NH48 314 aa12□□□□□ -0.49
LSM5-207ENST00000410044 OR52E5Q8NH55 327 aa12□□□□□ -0.49
LSM5-207ENST00000410044 SGMS2Q8NHU3 365 aa12□□□□□ -0.49
LSM5-207ENST00000410044 RNASE11Q8TAA1 199 aaKnown RBP12□□□□□ -0.49
LSM5-207ENST00000410044 TMEM68Q96MH6 324 aa12□□□□□ -0.49
LSM5-207ENST00000410044 NSG2Q9Y328 171 aa12□□□□□ -0.49
LSM5-207ENST00000410044 ALG5Q9Y673 324 aa12□□□□□ -0.49
LSM5-207ENST00000410044 A0A1B0GUS0 222 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 TMEM89A2RUT3 159 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 CGB1A6NKQ9 187 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 E7EUB6 86 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 AP4M1O00189 453 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 ADAP1O75689 374 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 CNIH1O95406 144 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 OR2B8PP59922 312 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 NDPQ00604 133 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 SMCO1Q147U7 214 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 AKIRIN2Q53H80 203 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 C19orf54Q5BKX5 351 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 C9orf152Q5JTZ5 239 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 THOC7Q6I9Y2 204 aaKnown RBP11.99□□□□□ -0.49
LSM5-207ENST00000410044 OR2T6Q8NHC8 308 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 LINC01006Q8NI28 216 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 SRSF12Q8WXF0 261 aaKnown RBP11.99□□□□□ -0.49
LSM5-207ENST00000410044 ARPC1AQ92747 370 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 SRSF8Q9BRL6 282 aaKnown RBP11.99□□□□□ -0.49
LSM5-207ENST00000410044 COMMD5Q9GZQ3 224 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 WNT10AQ9GZT5 417 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 NDUFA4L2Q9NRX3 87 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 CACNG5Q9UF02 275 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 FBXO7Q9Y3I1 522 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 OR51B2Q9Y5P1 312 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 NF1P21359 2839 aa11.99□□□□□ -0.49
LSM5-207ENST00000410044 C2CD3Q4AC94 2353 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 A0A1B0GW64 132 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 ATP6V0E1O15342 81 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 RPL27AP46776 148 aaKnown RBP11.98□□□□□ -0.49
LSM5-207ENST00000410044 TMEM267Q0VDI3 215 aaPredicted RBP11.98□□□□□ -0.49
LSM5-207ENST00000410044 Q6ZNX1 250 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.98□□□□□ -0.49
LSM5-207ENST00000410044 UXS1Q8NBZ7 420 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 TAF15Q92804 592 aaKnown RBP eCLIP11.98□□□□□ -0.49
LSM5-207ENST00000410044 SPIN2AQ99865 258 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 SPIN2BQ9BPZ2 258 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 QTRT1Q9BXR0 403 aaKnown RBP11.98□□□□□ -0.49
LSM5-207ENST00000410044 JMJD1CQ15652 2540 aa11.98□□□□□ -0.49
LSM5-207ENST00000410044 CLPSL1A2RUU4 121 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 MSGN1A6NI15 193 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 MPTX1A8MV57 137 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 INS-IGF2F8WCM5 200 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 TRAPPC2P0DI81 140 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 TRAPPC2BP0DI82 140 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 MYOD1P15172 320 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 VDAC2P45880 294 aaPredicted RBP11.97□□□□□ -0.49
LSM5-207ENST00000410044 GNB1P62873 340 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 FOXL1Q12952 345 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 C2orf68Q2NKX9 166 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 KRTAP24-1Q3LI83 254 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 HSD17B13Q7Z5P4 300 aaPredicted RBP11.97□□□□□ -0.49
LSM5-207ENST00000410044 STPG2Q8N412 459 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 WIPF2Q8TF74 440 aaPredicted RBP11.97□□□□□ -0.49
LSM5-207ENST00000410044 OR10C1Q96KK4 312 aa11.97□□□□□ -0.49
LSM5-207ENST00000410044 TEX22C9J3V5 150 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 PPIFP30405 207 aaKnown RBP11.96□□□□□ -0.49
LSM5-207ENST00000410044 SPCS3P61009 180 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 PRCDQ00LT1 54 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 ID3Q02535 119 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 CFHR3Q02985 330 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 IL15RAQ13261 267 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 C10orf55Q5SWW7 151 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 ASPHD1Q5U4P2 390 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 OR4D5Q8NGN0 318 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 C2orf50Q96LR7 162 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 GON7Q9BXV9 100 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 PARP11Q9NR21 331 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 HSPB7Q9UBY9 170 aa11.96□□□□□ -0.49
LSM5-207ENST00000410044 SETD2Q9BYW2 2564 aaPredicted RBP11.96□□□□□ -0.5
LSM5-207ENST00000410044 TRAV41A0A0B4J266 112 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 SSNA1O43805 119 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 RBMXL2O75526 392 aaKnown RBP11.95□□□□□ -0.5
LSM5-207ENST00000410044 BRI3O95415 125 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 OPN1MWP04001 364 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 CRYGCP07315 174 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 OPN1MW2P0DN77 364 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 OPN1MW3P0DN78 364 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 RIPPLY3P57055 190 aa11.95□□□□□ -0.5
LSM5-207ENST00000410044 PROK1P58294 105 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms