RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 CD83Q01151 205 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 SRSF4Q08170 494 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 POU2AF1Q16633 256 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 PRSS8Q16651 343 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 GGNBP1Q5YKI7 109 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 C12orf45Q8N5I9 185 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 NOL4LQ96MY1 436 aaPredicted RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 PHB2Q99623 299 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 QTRT1Q9BXR0 403 aaKnown RBP11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 RAB18Q9NP72 206 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 PARP11Q9NR21 331 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 CACNG5Q9UF02 275 aa11.16□□□□□ -0.62
CHRNA1-204ENST00000409323 FAM25EA8MYX2 175 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 ATP6V0E1O15342 81 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 SSNA1O43805 119 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 P0C879 139 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 FXYD3Q14802 87 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 HIST2H2BDQ6DRA6 164 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 VSTM2AQ8TAG5 236 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 TMEM167AQ8TBQ9 72 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 BET1LQ9NYM9 111 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 MMP24Q9Y5R2 645 aa11.15□□□□□ -0.62
CHRNA1-204ENST00000409323 M0QZK8 103 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 SIX6O95475 246 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 HLA-DRB1P01911 266 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 C1QBP02746 253 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 RPL8P62917 257 aaKnown RBP11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 SRPXP78539 464 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 NMSQ5H8A3 153 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 C11orf87Q6NUJ2 197 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 OR4A16Q8NH70 328 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 HINT2Q9BX68 163 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 ZNF436Q9C0F3 470 aaPredicted RBP11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 PRSS22Q9GZN4 317 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 WSB1Q9Y6I7 421 aa11.14□□□□□ -0.63
CHRNA1-204ENST00000409323 C13orf42A0A1B0GVH6 325 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 A0A1B0GW64 132 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 G3V318 75 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 GOSR2O14653 212 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 SNAPC5O75971 98 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 ACTL6BO94805 426 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 IL6RP08887 468 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 GIPP09681 153 aaPredicted RBP11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 VDAC1P21796 283 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 EIF2B2P49770 351 aaKnown RBP11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 ECSCRQ19T08 205 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 KRTAP24-1Q3LI83 254 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 SLC35E3Q7Z769 313 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 MMD2Q8IY49 270 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 LRTM2Q8N967 370 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 IL22RA2Q969J5 263 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 AIFM2Q9BRQ8 373 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 MGAT4CQ9UBM8 478 aa11.13□□□□□ -0.63
CHRNA1-204ENST00000409323 CGB1A6NKQ9 187 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 ST8SIA3O43173 380 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 ATG12O94817 140 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 MDKP21741 143 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 C19orf35Q6ZS72 473 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 NOXA1Q86UR1 476 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 OR10W1Q8NGF6 305 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 SRSF12Q8WXF0 261 aaKnown RBP11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 ARPC1AQ92747 370 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 WDR89Q96FK6 387 aaPredicted RBP11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 OR10C1Q96KK4 312 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 OR51B2Q9Y5P1 312 aa11.12□□□□□ -0.63
CHRNA1-204ENST00000409323 C5orf51A6NDU8 294 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 MSGN1A6NI15 193 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 C15orf61A6NNL5 157 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 G3V3Q6 166 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 HAX1O00165 279 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 REG1AP05451 166 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 EGR2P11161 476 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 VDAC2P45880 294 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 COMPP49747 757 aaPredicted RBP11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 H2BFSP57053 126 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 ZNF562Q6V9R5 426 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 LFNGQ8NES3 379 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 OR4A5Q8NH83 315 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 LSM10Q969L4 123 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 COMMD5Q9GZQ3 224 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 GSKIPQ9P0R6 139 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 TEX50A0A1B0GTY4 177 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 IFNA21P01568 189 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 IFNA17P01571 189 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 IGHG2P01859 326 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 RPL27AP46776 148 aaKnown RBP11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 RAP2BP61225 183 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 SMCO1Q147U7 214 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 ZFP69Q49AA0 526 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 ZNF329Q86UD4 541 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 OR1S1Q8NH92 325 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 OR2T6Q8NHC8 308 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 HYLS1Q96M11 299 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 SERTAD4Q9NUC0 356 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 TMEM14BQ9NUH8 114 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 TMED3Q9Y3Q3 217 aa11.11□□□□□ -0.63
CHRNA1-204ENST00000409323 TSPAN9O75954 239 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms