RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.21■□□□□ 0.19
VSX1-203ENST00000409285 ZNF580Q9UK33 172 aa16.21■□□□□ 0.19
VSX1-203ENST00000409285 ATRQ13535 2644 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 KCNAB3O43448 404 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 PITX3O75364 302 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 ACTL6BO94805 426 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 PDLIM3Q53GG5 364 aaPredicted RBP16.2■□□□□ 0.18
VSX1-203ENST00000409285 HSPB9Q9BQS6 159 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 PRSS22Q9GZN4 317 aa16.2■□□□□ 0.18
VSX1-203ENST00000409285 MPTX1A8MV57 137 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 TSPAN9O75954 239 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 RRAS2P62070 204 aaPredicted RBP16.19■□□□□ 0.18
VSX1-203ENST00000409285 CX3CL1P78423 397 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 THOC7Q6I9Y2 204 aaKnown RBP16.19■□□□□ 0.18
VSX1-203ENST00000409285 OR52E5Q8NH55 327 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 COMMD5Q9GZQ3 224 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 MED28Q9H204 178 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 ZNF702PQ9H963 129 aa16.19■□□□□ 0.18
VSX1-203ENST00000409285 CRIP2P52943 208 aaPredicted RBP16.18■□□□□ 0.18
VSX1-203ENST00000409285 OR2B8PP59922 312 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 NDPQ00604 133 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 C2orf68Q2NKX9 166 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 ARPC1AQ92747 370 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 OR10C1Q96KK4 312 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 CLCC1Q96S66 551 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 NSG2Q9Y328 171 aa16.18■□□□□ 0.18
VSX1-203ENST00000409285 FAM90A26D6RGX4 464 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 IGF1P05019 195 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 FXYD3Q14802 87 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 TNXAQ16473 311 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 GSG1LQ6UXU4 331 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 SRSF12Q8WXF0 261 aaKnown RBP16.17■□□□□ 0.18
VSX1-203ENST00000409285 OR51B2Q9Y5P1 312 aa16.17■□□□□ 0.18
VSX1-203ENST00000409285 CCSO14618 274 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 GOSR2O14653 212 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 ST8SIA3O43173 380 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 NDUFA7O95182 113 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 HSPE1P61604 102 aaKnown RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 IAH1Q2TAA2 248 aaPredicted RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 SLC35E3Q7Z769 313 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 OR4D5Q8NGN0 318 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 OR1L8Q8NGR8 309 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 SRSF8Q9BRL6 282 aaKnown RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 QTRT1Q9BXR0 403 aaKnown RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 NDUFA4L2Q9NRX3 87 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 MGAT4CQ9UBM8 478 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 HSPB7Q9UBY9 170 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 TEX50A0A1B0GTY4 177 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 SH2D7A6NKC9 451 aaPredicted RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 RBMXL2O75526 392 aaKnown RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 CNIH1O95406 144 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 CRYBA1P05813 215 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 RPL27AP46776 148 aaKnown RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 H2BFSP57053 126 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 GNB1P62873 340 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 PRCDQ00LT1 54 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 KRTAP21-3Q3LHN1 58 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 C10orf55Q5SWW7 151 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 Q6ZS46 218 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 Q6ZSV7 163 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 ZBTB8BQ8NAP8 495 aaPredicted RBP16.16■□□□□ 0.18
VSX1-203ENST00000409285 OR11H7Q8NGC8 314 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 OR1S1Q8NH92 325 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 SGMS2Q8NHU3 365 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 C2orf50Q96LR7 162 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 C16orf95Q9H693 158 aa16.16■□□□□ 0.18
VSX1-203ENST00000409285 C5orf51A6NDU8 294 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 CGB1A6NKQ9 187 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 INS-IGF2F8WCM5 200 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 SPCS3P61009 180 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 TNFRSF9Q07011 255 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 SRSF4Q08170 494 aaKnown RBP16.15■□□□□ 0.18
VSX1-203ENST00000409285 FCN2Q15485 313 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 HSD17B13Q7Z5P4 300 aaPredicted RBP16.15■□□□□ 0.18
VSX1-203ENST00000409285 ASB13Q8WXK3 278 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 PDCD10Q9BUL8 212 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 NMES1Q9C002 83 aa16.15■□□□□ 0.18
VSX1-203ENST00000409285 C13orf42A0A1B0GVH6 325 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 A0A1B0GW64 132 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 HMX3A6NHT5 357 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 E7EUB6 86 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 AP4M1O00189 453 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 ATP6V0E1O15342 81 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 EGR2P11161 476 aaPredicted RBP16.14■□□□□ 0.17
VSX1-203ENST00000409285 CXCL3P19876 107 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 CYCSP99999 105 aaKnown RBP16.14■□□□□ 0.17
VSX1-203ENST00000409285 IL15RAQ13261 267 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 C9orf152Q5JTZ5 239 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 TMEM68Q96MH6 324 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 FYTTD1Q96QD9 318 aaKnown RBP16.14■□□□□ 0.17
VSX1-203ENST00000409285 FBXO7Q9Y3I1 522 aa16.14■□□□□ 0.17
VSX1-203ENST00000409285 LINC01548A6NM66 108 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 FAM25EA8MYX2 175 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 TEX22C9J3V5 150 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 TRAPPC2P0DI81 140 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 TRAPPC2BP0DI82 140 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 MYOD1P15172 320 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 ID3Q02535 119 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 AKIRIN2Q53H80 203 aa16.13■□□□□ 0.17
VSX1-203ENST00000409285 C19orf54Q5BKX5 351 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms