RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 C9orf170A2RU37 121 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 PRAF2O60831 178 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 DHFRP00374 187 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 IGLV1-40P01703 118 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 RPA2P15927 270 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 UCP1P25874 307 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 PSMB8P28062 276 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM267Q0VDI3 215 aaPredicted RBP12.93□□□□□ -0.34
CXCL1-201ENST00000395761 PPP1R1AQ13522 171 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 TNXAQ16473 311 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 CXorf66Q5JRM2 361 aaPredicted RBP12.93□□□□□ -0.34
CXCL1-201ENST00000395761 CASTOR1Q8WTX7 329 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 GLYATL2Q8WU03 294 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 R3HDM4Q96D70 268 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 PLEKHA2Q9HB19 425 aa12.93□□□□□ -0.34
CXCL1-201ENST00000395761 A0A1W2PN81 502 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 MSGN1A6NI15 193 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 KBTBD11O94819 623 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 OR5AC1P0C628 307 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 ANXA3P12429 323 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 NQO2P16083 231 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 CHRNA7P36544 502 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM187Q14656 261 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 AKIRIN2Q53H80 203 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 C10orf55Q5SWW7 151 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 ASPHD1Q5U4P2 390 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 OR4A47Q6IF82 309 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 LYG2Q86SG7 212 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 MMD2Q8IY49 270 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM167AQ8TBQ9 72 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM222Q9H0R3 208 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 ZFP57Q9NU63 452 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 FOXA2Q9Y261 457 aaPredicted RBP12.92□□□□□ -0.34
CXCL1-201ENST00000395761 MGAM2Q2M2H8 2515 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 CMYA5Q8N3K9 4069 aa12.92□□□□□ -0.34
CXCL1-201ENST00000395761 TRAV3A0A0B4J244 114 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 DUS4LO95620 317 aaKnown RBP12.91□□□□□ -0.34
CXCL1-201ENST00000395761 CDS2O95674 445 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 SERPINE2P07093 398 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 IL6RP08887 468 aaPredicted RBP12.91□□□□□ -0.34
CXCL1-201ENST00000395761 APELAP0DMC3 54 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 PF4V1P10720 104 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 MYOD1P15172 320 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 RAB25P57735 213 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 DHRS2Q13268 280 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 POU2AF1Q16633 256 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 SP6Q3SY56 376 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 C4orf46Q504U0 113 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 CADM3Q8N126 398 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 LRTM2Q8N967 370 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 OR5T1Q8NG75 326 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 VSTM2AQ8TAG5 236 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 SRSF12Q8WXF0 261 aaKnown RBP12.91□□□□□ -0.34
CXCL1-201ENST00000395761 IL22RA2Q969J5 263 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM56Q96MV1 263 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 BET1LQ9NYM9 111 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 COMMD9Q9P000 198 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM56-RWDD3S4R434 201 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 NBEAL1Q6ZS30 2694 aa12.91□□□□□ -0.34
CXCL1-201ENST00000395761 A0A0B4J2A0 478 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 PIGBOS1A0A0B4J2F0 54 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 SNRPGP15A8MWD9 76 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 E7EUB6 86 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 UPK2O00526 184 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 KRASP01116 189 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 HLA-AP01891 365 aaKnown RBP12.9□□□□□ -0.34
CXCL1-201ENST00000395761 VAMP1P23763 118 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 RAB9AP51151 201 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 DMBX1Q8NFW5 382 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 OR4F17Q8NGA8 305 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 MYOZ3Q8TDC0 251 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 ZNF431Q8TF32 576 aaPredicted RBP12.9□□□□□ -0.34
CXCL1-201ENST00000395761 MITD1Q8WV92 249 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 MS4A10Q96PG2 267 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 OR4F4Q96R69 305 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 AIFM2Q9BRQ8 373 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 GPN1Q9HCN4 374 aaPredicted RBP12.9□□□□□ -0.34
CXCL1-201ENST00000395761 TMEM140Q9NV12 185 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 SHPKQ9UHJ6 478 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 TNCP24821 2201 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 FBN3Q75N90 2809 aa12.9□□□□□ -0.34
CXCL1-201ENST00000395761 A0A1B0GW64 132 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 NUDT19A8MXV4 375 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 CREBL2O60519 120 aaPredicted RBP12.89□□□□□ -0.35
CXCL1-201ENST00000395761 ACTL6BO94805 426 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 IGKV1-39P01597 117 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 IGKV1D-39P04432 117 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 G6PCP35575 357 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 CDX1P47902 265 aaPredicted RBP12.89□□□□□ -0.35
CXCL1-201ENST00000395761 RPL8P62917 257 aaKnown RBP12.89□□□□□ -0.35
CXCL1-201ENST00000395761 SRPXP78539 464 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 TMEM65Q6PI78 240 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 C8orf86Q6ZUL3 223 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 ZNF695Q8IW36 515 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 LGI3Q8N145 548 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 KLHL30-AS1Q8NEE0 82 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 OR5M8Q8NGP6 311 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 OR4A5Q8NH83 315 aa12.89□□□□□ -0.35
CXCL1-201ENST00000395761 PHB2Q99623 299 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms