RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 TRBV6-4A0A1B0GX49 114 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TLCD2A6NGC4 264 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 hCG_2039718K7EN88 272 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 FAAHO00519 579 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 COPEO14579 308 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CDIPTO14735 213 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 ACOX3O15254 700 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 FABP7O15540 132 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SC5DO75845 299 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 ARL6IP5O75915 188 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 HBZP02008 142 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CTSDP07339 412 aaPredicted RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 IFITM1P13164 125 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TUBG1P23258 451 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 DEKP35659 375 aaKnown RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SSR2P43308 183 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CSN1S1P47710 185 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 BCAP31P51572 246 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 AQP5P55064 265 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 RPL30P62888 115 aaKnown RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 FKBP1AP62942 108 aaKnown RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 RHOGP84095 191 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 STX5Q13190 355 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 OR4D1Q15615 310 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CAVIN4Q5BKX8 364 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 RNASE10Q5GAN6 216 aaKnown RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 C1orf137Q5JT78 98 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SPANXN5Q5MJ07 72 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 Q6ZT83 130 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SSX8Q7RTT4 187 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 GPHB5Q86YW7 130 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 PRR15Q8IV56 129 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TBC1D19Q8N5T2 526 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 COMMD1Q8N668 190 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 GLYATL2Q8WU03 294 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SFT2D1Q8WV19 159 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM239Q8WW34 195 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 ANKRD7Q92527 254 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 ITFG2Q969R8 447 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CIDECQ96AQ7 238 aaPredicted RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 KIAA1143Q96AT1 154 aaPredicted RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 MS4A6EQ96DS6 147 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 OR7D2Q96RA2 312 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM147Q9BVK8 224 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 OR8D2Q9GZM6 311 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 IQCGQ9H095 443 aaKnown RBP-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 SYT4Q9H2B2 425 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 GAL3ST2Q9H3Q3 398 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 XAGE1AQ9HD64 81 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 IFT46Q9NQC8 304 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 XPNPEP1Q9NQW7 623 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 CHRAC1Q9NRG0 131 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TUBG2Q9NRH3 451 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 PSME2Q9UL46 239 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 TNFSF18Q9UNG2 199 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 BCORL1Q5H9F3 1711 aa-0.45□□□□□ -2.48
SNORD28-201ENST00000384706 FREM3P0C091 2139 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 TRAV12-1A0A0B4J245 112 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 GGT3PA6NGU5 568 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 FXYD1O00168 92 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CASQ2O14958 399 aaPredicted RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 LYZL6O75951 148 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 UBL3O95164 117 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 KRT75O95678 551 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 SNAP29O95721 258 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 ASS1P00966 412 aaKnown RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 IGHV3-7P01780 117 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CRYGAP11844 174 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CCL4P13236 92 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 RPS4Y1P22090 263 aaKnown RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 AGTR1P30556 359 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 S100A7P31151 101 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 RAB13P51153 203 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF80P51504 273 aaPredicted RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 DAD1P61803 113 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 GNA13Q14344 377 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 LINC01554Q52M75 96 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CDKL4Q5MAI5 379 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 SAPCD1Q5SSQ6 148 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 IBA57Q5T440 356 aaKnown RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 AADACL4Q5VUY2 407 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 LCN8Q6JVE9 175 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 HAGHLQ6PII5 290 aaPredicted RBP-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 XKRXQ6PP77 449 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CLEC2AQ6UVW9 174 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 ASCL4Q6XD76 172 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CRLF3Q8IUI8 442 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 PDCL2Q8N4E4 241 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM251Q8N6I4 163 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 ZNF321PQ8N8H1 164 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 C4orf3Q8WVX3 66 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 IFT81Q8WYA0 676 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 C11orf40Q8WZ69 217 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 PSMF1Q92530 271 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 TMEM106AQ96A25 262 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 TLCD1Q96CP7 247 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 CATSPER2Q96P56 530 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 MAP1LC3CQ9BXW4 147 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 ULBP3Q9BZM4 244 aa-0.46□□□□□ -2.48
SNORD28-201ENST00000384706 RAB1BQ9H0U4 201 aa-0.46□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms