RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 J3QR06 171 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 KBTBD11O94819 623 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 TMEM249Q2WGJ8 235 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 TMEM177Q53S58 311 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 OR5B3Q8NH48 314 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 OR4A5Q8NH83 315 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 OR9G1Q8NH87 305 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 CA5BP1Q8WTZ4 195 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 TNFRSF14Q92956 283 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 NEIL1Q96FI4 390 aaPredicted RBP18.87■□□□□ 0.61
VPS16-201ENST00000380443 NIPSNAP3BQ9BS92 247 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 PCGF1Q9BSM1 259 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 ZNF462Q96JM2 2506 aa18.87■□□□□ 0.61
VPS16-201ENST00000380443 COLCA2A8K830 154 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 PLAUP00749 431 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 FOLR2P14207 255 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 IL3RAP26951 378 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 OPRK1P41145 380 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 PRCDQ00LT1 54 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 CYB561D1Q8N8Q1 229 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 SLC24A4Q8NFF2 622 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 OR10X1Q8NGY0 326 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 TVP23CQ96ET8 276 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 PUS1Q9Y606 427 aaKnown RBP eCLIP18.86■□□□□ 0.61
VPS16-201ENST00000380443 A0A1W2PPH5 198 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 H3BQ15 152 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 RRHO14718 337 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 IGKV1D-33P01593 117 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 IGKV1-33P01594 117 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 IFNA4P05014 189 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 NPY1RP25929 384 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 RNF212Q495C1 297 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 AVPI1Q5T686 147 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 SSX7Q7RTT5 188 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 PDPNQ86YL7 162 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 NPVFQ9HCQ7 196 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 MANBALQ9NQG1 85 aa18.86■□□□□ 0.61
VPS16-201ENST00000380443 DOCK11Q5JSL3 2073 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 A0A087WWC5 75 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 ZFP92A6NM28 416 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 B4DEV8 164 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 SEC14L6B5MCN3 397 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 H0YJW9 148 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 VSTM2AQ8TAG5 236 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 RAB1CQ92928 201 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 PLEKHA3Q9HB20 300 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 MLXQ9UH92 298 aa18.85■□□□□ 0.61
VPS16-201ENST00000380443 MT-ND4LP03901 98 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 PNRC1Q12796 327 aaPredicted RBP18.84■□□□□ 0.61
VPS16-201ENST00000380443 AKIRIN2Q53H80 203 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 ABHD12Q8N2K0 398 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 MRPL20Q9BYC9 149 aaKnown RBP18.84■□□□□ 0.61
VPS16-201ENST00000380443 RBP4P02753 201 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 FGF8P55075 233 aaPredicted RBP18.84■□□□□ 0.61
VPS16-201ENST00000380443 RPS16P62249 146 aaKnown RBP18.84■□□□□ 0.61
VPS16-201ENST00000380443 TREML4Q6UXN2 200 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 OR4C13Q8NGP0 309 aa18.84■□□□□ 0.61
VPS16-201ENST00000380443 YLPM1P49750 1951 aaKnown RBP18.83■□□□□ 0.6
VPS16-201ENST00000380443 INS-IGF2F8WCM5 200 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 SIAH2O43255 324 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 IGHV1-8P0DP01 117 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 MC5RP33032 325 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 PSMB3P49720 205 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 RAB13P51153 203 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 RAB31Q13636 194 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 Q8N7P7 452 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 ST6GALNAC6Q969X2 333 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 FLYWCH2Q96CP2 140 aaKnown RBP18.83■□□□□ 0.6
VPS16-201ENST00000380443 ARFGEF3Q5TH69 2177 aa18.83■□□□□ 0.6
VPS16-201ENST00000380443 IGKV1-16P04430 117 aa18.82■□□□□ 0.6
VPS16-201ENST00000380443 TMEM170AQ8WVE7 144 aa18.82■□□□□ 0.6
VPS16-201ENST00000380443 RAB24Q969Q5 203 aa18.82■□□□□ 0.6
VPS16-201ENST00000380443 NABP2Q9BQ15 211 aa18.82■□□□□ 0.6
VPS16-201ENST00000380443 RAB1BQ9H0U4 201 aa18.82■□□□□ 0.6
VPS16-201ENST00000380443 SMCO3A2RU48 225 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 IGHV2-70P01814 119 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 USF1P22415 310 aaPredicted RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 GRNP28799 593 aaKnown RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 HARBI1Q96MB7 349 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 C20orf24Q9BUV8 137 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 TMEM133Q9H2Q1 129 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 SIRT7Q9NRC8 400 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 TEX50A0A1B0GTY4 177 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 SRRM4A7MD48 611 aaKnown RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 TMEM250H0YL14 139 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 SAA1P0DJI8 122 aaPredicted RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 MAS1LP35410 378 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 CDC34P49427 236 aaPredicted RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 FAM90A2PQ658T7 463 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 SLC25A22Q9H936 323 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 WASHC3Q9Y3C0 194 aa18.81■□□□□ 0.6
VPS16-201ENST00000380443 LSM4Q9Y4Z0 139 aaKnown RBP18.81■□□□□ 0.6
VPS16-201ENST00000380443 CXorf65A6NEN9 183 aa18.8■□□□□ 0.6
VPS16-201ENST00000380443 CA2P00918 260 aa18.8■□□□□ 0.6
VPS16-201ENST00000380443 ERVFRD-1P60508 538 aa18.8■□□□□ 0.6
VPS16-201ENST00000380443 MEF2BQ02080 365 aaPredicted RBP18.8■□□□□ 0.6
VPS16-201ENST00000380443 C2orf83Q53S99 150 aa18.8■□□□□ 0.6
VPS16-201ENST00000380443 TMEM167AQ8TBQ9 72 aa18.8■□□□□ 0.6
VPS16-201ENST00000380443 CRYBA1P05813 215 aa18.79■□□□□ 0.6
VPS16-201ENST00000380443 FBP1P09467 338 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms